Molecular Geometry • Molecules are 3-dimensional objects • We often describe the shape of a molecule with terms that relate to geometric figures • These geometric figures have character
Trang 2Structure Determines Properties!
• properties of molecular substances depend on the structure of the molecule
• the structure includes many factors, including:
the skeletal arrangement of the atoms
the kind of bonding between the atoms
ionic, polar covalent, or covalent
the shape of the molecule
• bonding theory should allow you to predict the shapes of molecules
Trang 3Molecular Geometry
• Molecules are 3-dimensional objects
• We often describe the shape of a molecule
with terms that relate to geometric figures
• These geometric figures have characteristic
“corners” that indicate the positions of the
surrounding atoms around a central atom in
the center of the geometric figure
• The geometric figures also have characteristic angles that we call bond angles
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 4Using Lewis Theory to Predict
Molecular Shapes
• Lewis theory predicts there are regions of
electrons in an atom based on placing shared
pairs of valence electrons between bonding
nuclei and unshared valence electrons located
on single nuclei
• this idea can then be extended to predict the
shapes of molecules by realizing these regions are all negatively charged and should repel
Trang 5VSEPR Theory
• electron groups around the central atom will be most stable when they are as far apart as
possible – we call this valence shell electron
pair repulsion theory
since electrons are negatively charged, they should
be most stable when they are separated as much as possible
• the resulting geometric arrangement will allow
us to predict the shapes and bond angles in the molecule
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 66
Trang 7VSEPR electron domain animation
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 9Molecular Geometries
• there are 5 basic arrangements of electron groups
around a central atom
based on a maximum of 6 bonding electron groups
though there may be more than 6 on very large atoms, it is very rare
• each of these 5 basic arrangements results in 5 different basic molecular shapes
in order for the molecular shape and bond angles to be a
“perfect” geometric figure, all the electron groups must be bonds and all the bonds must be equivalent
• for molecules that exhibit resonance, it doesn’t matter which resonance form you use – the molecular
geometry will be the same
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 10Linear Geometry
• when there are 2 electron groups around the central atom, they will occupy positions opposite each other around the central atom
• this results in the molecule taking a linear geometry
• the bond angle is 180°
O
Trang 11Linear Geometry
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 12Trigonal Geometry
• when there are 3 electron groups around the central atom, they will occupy positions in the shape of a
triangle around the central atom
• this results in the molecule taking a trigonal planar geometry
• the bond angle is 120°
F
Trang 13Trigonal Geometry
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 14Not Quite Perfect Geometry
Because the bonds are
not identical, the
observed angles are
slightly different from
ideal.
Trang 1515 Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 16Tetrahedral Geometry
• when there are 4 electron groups around the central atom, they will occupy positions in the shape of a
tetrahedron around the central atom
• this results in the molecule taking a tetrahedral
F
F
Trang 17Tetrahedral Geometry
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 18Methane
Trang 19Trigonal Bipyramidal Geometry
• when there are 5 electron groups around the central atom, they will occupy positions in the shape of a two tetrahedra that are base-to-base with the central atom in the center of the shared bases
• this results in the molecule taking a trigonal bipyramidal
geometry
• the positions above and below the central atom are called the
axial positions
• the positions in the same base plane as the central atom are
called the equatorial positions
• the bond angle between equatorial positions is 120°
• the bond angle between axial and equatorial positions is 90°
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 20Trigonal Bipyramid
Trang 2222
Trang 23Octahedral Geometry
• when there are 6 electron groups around the central atom, they will occupy positions in the shape of two square-base pyramids that are base-to-base with the central atom in the center of the shared bases
• this results in the molecule taking an octahedral
geometry
it is called octahedral because the geometric figure has 8 sides
• all positions are equivalent
• the bond angle is 90°
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 24Octahedral Geometry
Trang 2626
Trang 27The Effect of Lone Pairs
• lone pair groups “occupy more space” on the central atom
because their electron density is exclusively on the
central atom rather than shared like bonding electron
groups
• relative sizes of repulsive force interactions is:
Lone Pair – Lone Pair > Lone Pair – Bonding Pair > Bonding Pair – Bonding Pair
• this effects the bond angles, making them smaller
than expected
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 28Effect of Lone Pairs
The bonding electrons are shared by two atoms,
so some of the negative charge is removed from the central atom.
The nonbonding electrons are localized on the central atom, so area of negative charge takes more space.
Trang 29Derivative Shapes
• the molecule’s shape will be one of basic
molecular geometries if all the electron groups are bonds and all the bonds are equivalent
• molecules with lone pairs or different kinds of surrounding atoms will have distorted bond
angles and different bond lengths, but the shape will be a derivative of one of the basic shapes
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 30Derivative of Trigonal Geometry
• when there are 3 electron groups around the central atom, and 1 of them is a lone pair, the resulting shape
of the molecule is called a trigonal planar - bent
O
Trang 31 because it is a triangular-base pyramid with the central
atom at the apex
• when there are 4 electron groups around the central atom, and 2 are lone pairs, the result is called a
tetrahedral-bent shape
it is planar
it looks similar to the trigonal planar-bent shape, except the angles are smaller
• for both shapes, the bond angle is < 109.5°
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 32Trigonal Pyramidal Shape
Trang 33Bond Angle Distortion from Lone Pairs
Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 34Tetrahedral-Bent Shape
Trang 35Chemistry, Julia Burdge, 2 nd e., McGraw Hill.
Trang 36Bond Angle Distortion from Lone Pairs
Trang 37Tro, Chemistry: A Molecular Approach 37
Tetrahedral-Bent Shape
1
O Cl
Trang 38Derivatives of the Trigonal Bipyramidal Geometry
• when there are 5 electron groups around the central atom, and some are lone pairs, they will occupy the equatorial positions because there is more room
• when there are 5 electron groups around the central atom, and 1
is a lone pair, the result is called see-saw shape
aka distorted tetrahedron
• when there are 5 electron groups around the central atom, and 2 are lone pairs, the result is called T-shaped
• when there are 5 electron groups around the central atom, and 3 are lone pairs, the result is called a linear shape
• the bond angles between equatorial positions is < 120°
• the bond angles between axial and equatorial positions is < 90°
linear = 180° axial-to-axial
Trang 39Tro, Chemistry: A Molecular Approach 39
Replacing Atoms with Lone Pairs
in the Trigonal Bipyramid System
Trang 41Tro, Chemistry: A Molecular Approach 41
T-Shape
Trang 43Tro, Chemistry: A Molecular Approach 43
Linear Shape
Trang 44Derivatives of the Octahedral Geometry
• when there are 6 electron groups around the central
atom, and some are lone pairs, each even number lone pair will take a position opposite the previous lone pair
• when there are 6 electron groups around the central
atom, and 1 is a lone pair, the result is called a square pyramid shape
the bond angles between axial and equatorial positions is < 90°
• when there are 6 electron groups around the central
atom, and 2 are lone pairs, the result is called a square planar shape
the bond angles between equatorial positions is 90°
Trang 45Tro, Chemistry: A Molecular Approach 45
Square Pyramidal Shape
Br
F
FFF
Trang 46Square Planar Shape
Trang 47Tro, Chemistry: A Molecular Approach 47
Trang 48Predicting the Shapes Around Central Atoms 1) Draw the Lewis Structure
2) Determine the Number of Electron Groups
around the Central Atom
3) Classify Each Electron Group as Bonding or
Lone pair, and Count each type
remember, multiple bonds count as 1 group
4) Use Table 10.1 to Determine the Shape and
Bond Angles
Trang 49VSEPR animation
Trang 50Practice – Predict the Molecular Geometry and
Bond Angles in SiF5-1
Trang 51Tro, Chemistry: A Molecular Approach 51
Practice – Predict the Molecular Geometry and
Bond Angles in SiF5─
Trang 52Practice – Predict the Molecular Geometry and
Bond Angles in ClO2F
Trang 53Tro, Chemistry: A Molecular Approach 53
Practice – Predict the Molecular Geometry and
Bond Angles in ClO2F
Trang 54Representing 3-Dimensional Shapes on
a 2-Dimensional Surface
• one of the problems with drawing molecules is trying
to show their dimensionality
• by convention, the central atom is put in the plane of the paper
• put as many other atoms as possible in the same plane
and indicate with a straight line
• for atoms in front of the plane, use a solid wedge
• for atoms behind the plane, use a hashed wedge
Trang 55Tro, Chemistry: A Molecular Approach 55
Trang 56SF
FF
Trang 57Tro, Chemistry: A Molecular Approach 57
Multiple Central Atoms
• many molecules have larger structures with many
interior atoms
• we can think of them as having multiple central atoms
• when this occurs, we describe the shape around each central atom in sequence
H
C H
||
|
O H
shape around left C is tetrahedral
shape around center C is trigonal planar
shape around right O is tetrahedral-bent
Trang 58Describing the Geometry
of Methanol
Trang 59Tro, Chemistry: A Molecular Approach 59
Describing the Geometry
of Glycine
Trang 60Practice – Predict the Molecular Geometries in
H3BO3
Trang 62Polarity of Molecules
• in order for a molecule to be polar it must
1) have polar bonds
electronegativity difference - theory
bond dipole moments - measured
2) have an unsymmetrical shape
vector addition
• polarity affects the intermolecular forces of attraction
therefore boiling points and solubilities
like dissolves like
• nonbonding pairs affect molecular polarity, strong
pull in its direction
Trang 63Tro, Chemistry: A Molecular Approach 63
Molecule Polarity
The H-Cl bond is polar The bonding electrons are pulled toward the Cl end of the molecule The net result is a polar molecule.
Trang 64Vector Addition
Trang 65Tro, Chemistry: A Molecular Approach 65
Trang 66Molecule Polarity
The O-C bond is polar The bonding electrons are pulled equally toward both O ends of the molecule The net result is a nonpolar molecule.
Trang 67Tro, Chemistry: A Molecular Approach 67
Molecule Polarity
The H-O bond is polar The both sets of bonding electrons are pulled toward the O end of the molecule The net result is a polar molecule.
Trang 68Molecule Polarity
The H-N bond is polar All the sets of bonding electrons are pulled toward the N end of the molecule The net result is a polar molecule.
Trang 69Tro, Chemistry: A Molecular Approach 69
Molecular Polarity Affects
Solubility in Water
• polar molecules are attracted to
other polar molecules
• since water is a polar molecule,
other polar molecules dissolve
well in water
and ionic compounds as well
• some molecules have both polar
and nonpolar parts
Trang 70A Soap Molecule Sodium Stearate
Trang 71Tro, Chemistry: A Molecular Approach 71
Practice - Decide Whether the Following Are Polar
Trang 72Practice - Decide Whether the Following Are Polar
polar
nonpolar
1) polar bonds, N-O
2) asymmetrical shape 1) polar bonds, all S-O
N
O
3.0 3.0
3.5
O
O
OS
3.5
2.5
Trang 73Tro, Chemistry: A Molecular Approach 73
Problems with Lewis Theory
• Lewis theory gives good first approximations of the bond angles in molecules, but usually cannot
be used to get the actual angle
• Lewis theory cannot write one correct structure for many molecules where resonance is
Trang 74Valence Bond Theory
• Linus Pauling and others applied the principles
of quantum mechanics to molecules
• they reasoned that bonds between atoms would arise when the orbitals on those atoms
interacted to make a bond
• the kind of interaction depends on whether the orbitals align along the axis between the nuclei,
or outside the axis
Trang 75Tro, Chemistry: A Molecular Approach 75
Orbital Interaction
• as two atoms approached, the partially filled or empty valence atomic orbitals on the atoms
would interact to form molecular orbitals
• the molecular orbitals would be more stable
than the separate atomic orbitals because they would contain paired electrons shared by both atoms
the interaction energy between atomic orbitals is negative when the interacting atomic orbitals
contain a total of 2 electrons
Trang 76Orbital Diagram for the
Trang 77Tro, Chemistry: A Molecular Approach 77
Valence Bond Theory - Hybridization
• one of the issues that arose was that the number of
partially filled or empty atomic orbital did not predict the number of bonds or orientation of bonds
C = 2s22p x1 2p y1 2p z0 would predict 2 or 3 bonds that are 90° apart, rather than 4 bonds that are 109.5° apart
• to adjust for these inconsistencies, it was
postulated that the valence atomic orbitals could
hybridize before bonding took place
one hybridization of C is to mix all the 2s and 2p
orbitals to get 4 orbitals that point at the corners of a tetrahedron
Trang 78Unhybridized C Orbitals Predict the
Wrong Bonding & Geometry
Trang 79Tro, Chemistry: A Molecular Approach 79
Valence Bond Theory
Main Concepts
quantum mechanical atomic orbitals or hybrid orbitals
orbitals overlap and there is a total of 2 electrons in the new molecular orbital
a) the electrons must be spin paired
the geometry of the overlapping orbitals
Trang 80more bonds = more full orbitals = more stability
• better explain observed shapes of molecules
• same type of atom can have different
hybridization depending on the compound
C = sp, sp2, sp3
Trang 81Tro, Chemistry: A Molecular Approach 81
Hybrid Orbitals
• H cannot hybridize!!
• the number of standard atomic orbitals combined = the number of hybrid orbitals formed
• the number and type of standard atomic orbitals
combined determines the shape of the hybrid orbitals
• the particular kind of hybridization that occurs is the
one that yields the lowest overall energy for the
molecule
in other words, you have to know the structure of the
molecule beforehand in order to predict the hybridization
Trang 82Orbital Diagrams with
Hybridization
• place electrons into hybrid and unhybridized
valence orbitals as if all the orbitals have equal energy
• when bonding, bonds form between hybrid
orbitals and bonds form between unhybridized orbitals that are parallel
Trang 83Tro, Chemistry: A Molecular Approach 83
2sp3
Trang 84sp3 Hybridization
• atom with 4 areas of electrons
tetrahedral geometry
109.5° angles between hybrid orbitals
• atom uses hybrid orbitals for all bonds and
Trang 85Hybridization animation
Trang 86sp3 Hybridization of C
Trang 87Tro, Chemistry: A Molecular Approach 87
Trang 89Tro, Chemistry: A Molecular Approach 89