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• Same connections, different spatial arrangement of atoms – Enantiomers nonsuperimposable mirror images – Diastereomers all other stereoisomers... • Some objects are not the same as the

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Stereochemistry

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A Brief Review of Isomerism

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Constitutional Isomers

• Different order of connections gives different

carbon backbone and/or different functional

groups

Trang 4

• Same connections, different spatial arrangement of

atoms

– Enantiomers (nonsuperimposable mirror images)

– Diastereomers (all other stereoisomers)

Trang 5

Sự quay xung quanh một liên kết σσσσ là được phép

(CONSTITUTIONAL ISOMERS)

Trang 6

ĐỒ NG PHÂN CẤU TRẠNG

 Có thể có nhiều cách sắp xếp trong không gian

khác nhau của các nguyên tử trong phân tử H 2 O 2

 Cấu trạng (Conformation): Là bất kỳ cách sắp xếp

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PHÉP CHIẾU NEWMAN

Công thức phối cảnh

Công thức phối cảnh

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ETHANE

Trang 9

PROPANE

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Quy tắc Cahn–Ingold–Prelog

• Bậc nguyên tử càng lớn thứ tự ưu tiên càng

lớn: I > Br > Cl > H

• Nguyên tử đầu tiên giống nhau: Xét tiếp

nguyên tử kế tiếp cho đến khi thấy được sự

khác biệt: CH2OH > CH(CH3)2 > CH3

• Liên kết đôi: bằng hai liên kết đơn,…

COOH > CHO > CH OH

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DANH PHÁP E–Z

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ĐỒNG PHÂN CIS-TRANS

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HỢP CHẤT MẠCH VÒNG

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HỢP CHẤT NHỊ VÒNG

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ĐỒNG PHÂN CIS-TRANS

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• Some objects are not the same as their mirror

images (they have no plane of symmetry)

– A right-hand glove is different than a left-hand

glove

– The property is commonly called “handedness”

• Organic molecules (including many drugs) have

handedness that results from substitution patterns

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Enantiomers – Mirror Images

• Molecules exist as three-dimensional

objects

• Some molecules are the same as their

mirror image

• Some molecules are different than their

mirror image: These are stereoisomers

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Enantiomers and the Tetrahedral Carbon

• Enantiomers are molecules that are not the same

as their mirror image

• They are the “same” if the positions of the atoms

can coincide on a one-to-one basis

• This is illustrated by enantiomers of lactic acid

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Examples of Enantiomers

• Molecules that have one carbon with 4 different

substituents have a nonsuperimposable mirror

image – enantiomer

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Mirror-image Forms of Lactic Acid

• When H and

OH substituents match up,

COOH and CH 3 don’t

• when COOH and CH 3

coincide, H and OH don’t

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The Reason for Handedness: Chirality

• Molecules that are not superimposable with their

mirror images are chiral (have handedness)

• A plane of symmetry divides an entire molecule

into two pieces that are exact mirror images

• A molecule with a plane of symmetry is the same

as its mirror image and is said to be achiral

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• If an object has a plane of symmetry it is

necessarily the same as its mirror image

• The lack of a plane of symmetry is called

“handedness”, chirality

• Hands, gloves are prime examples of chiral object

– They have a “left” and a “right” version

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Plane of Symmetry

• The plane has the

same thing on both

sides for the flask

• There is no mirror

plane for a hand

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Chirality Centers

• A point in a molecule where four different groups

(or atoms) are attached to carbon is called a

chirality center

• A chiral molecule usually has at least one chirality

center

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Chirality Centers in Chiral Molecules

• Groups are considered “different” if there is any

structural variation

• In cyclic molecules, we compare by following in

each direction in a ring

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Optical Activity

• Light restricted to pass through a plane is

plane-polarized

• Plane-polarized light that passes through solutions

of achiral compounds remains in that plane

• Solutions of chiral compounds rotate

plane-polarized light and the molecules are said to be

optically active

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Optical Activity

• Light passes through a plane polarizer

• Plane polarized light is rotated in solutions of

optically active compounds

• Measured with polarimeter

• Rotation, in degrees, is [α]

• Clockwise rotation is called dextrorotatory

• Anti-clockwise is levorotatory

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Measurement of Optical Rotation

• A polarimeter measures the rotation of

plane-polarized that has passed through a solution

• The angle between the entrance and exit planes is

the optical rotation

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Specific Rotation

Specific rotation : [αααα] D

[α]D= observed rotation/(pathlength x concentration)

= α/(l x C) = degrees/(dm x g/mL)

• Specific rotation is that observed for 1 g/mL in

solution in cell with a 10 cm path using light from

sodium metal vapor (589 nanometers)

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28 mg of mandelic acid was dissolved in 1

cm3 of ethanol and the solution placed in a

10 cm long polarimeter cell An optical

rotation α of –4.35° was measured at 20°C

with light of wavelength 589 nm What is

the specific rotation of the acid?

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Enantiomeric excess

• A 50:50 mixture of two chiral compounds that are

mirror images does not rotate light: called a

racemic mixture.

• A racemic mixture has zero net rotation.

• The composition of a mixture of enantiomers is

given by the enantiomeric excess (e.e): the

percentage excess of the major enantiomer over

the minor enantiomer

ee = % Major−% Minor

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The optical purity

• An older term, is numerically identical to

enantiomeric excess

• It represents the observed rotation, relative to the

rotation of the pure enantiomer

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The optical purity

Example: (S)-(+)-2-Bromobutane has an observed specific

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Pasteur’s Discovery of Enantiomers (1849)

• Louis Pasteur discovered that sodium ammonium

salts of tartaric acid crystallize into right handed

and left handed forms

• The optical rotations of equal concentrations of

these forms have opposite optical rotations

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Relative 3-Dimensional Structure

• The original method was a

correlation system,

classifying related molecules

into “families” focused on

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Rules for Specification of Configuration

• A general method applies to the configuration at eachchirality center (instead of to the the whole molecule)

• The configuration is specified by the relativepositions of all the groups with respect to each other

at the chirality center

• The groups are ranked in an established prioritysequence and compared

• The relationship of the groups in priority order inspace determines the label applied to the

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Sequence Rules (IUPAC)

• Assign each group priority according to the

Cahn-Ingold-Prelog scheme with the lowest priority group

pointing away, look at remaining 3 groups in a plane

• Clockwise is designated R (from Latin for “right”)

• Counterclockwise is designated S (from Latin word

for “left”)

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R-Configuration at Chirality Center

• Lowest priority group is pointed away and

direction of higher 3 is clockwise, or right turn

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Examples of Applying Sequence Rules

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Đồ ng phân đố i quang hay

của cùng một chất?

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Tương đương với

VẼ CẤU TRÚC ĐỒNG PHÂN ĐỐI QUANG:

CÔNG THỨC FISCHER

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C H

(R))))−−−−((((−−−−)-Lactic acid

C COOH

Y

X Z

PHÉP

CHIẾU

FISCHER

Trang 49

C H

CH 3 HOOC NH 2

H

CH 3 HOOC NH 2 1 =

2

3

4

1 2

3 (S)-Alanine

C

CHO

H HO

CHO

H HO

1

2

Giữ cố định

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FISCHER PROJECTION

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FISCHER PROJECTION

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Cấu hình R hay S ?

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Molecules with More Than Two

Chirality Centers

• Molecules can have many chirality centers

• Each point has two possible permanent

arrangements (R or S), generating two possible

stereoisomers

• So the number of possible stereoisomers with n

chirality centers is 2n

Trang 54

• Molecules with more than

one chirality center have

mirror image stereoisomers

that are enantiomers

• In addition they can have

stereoisomeric forms that

are not mirror images,

2R,3R 2S,3S

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 Are stereoisomers that are not enantiomers

 The physical and chemical properties of a pair

of diastereoisomers are different

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Số đồng phân lập thể = 22

Diastereoisomers

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2S,3R 2R,3S 2S,3S 2R,3R

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Diastereoisomers

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Đồng phân lập thể của 2-chloro-3-hexanol ?

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 Diastereoisomers can be chiral or achiral

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CHIRAL AND ACHIRAL DISUBSTITUTED CYCLOALKANES

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Meso Compounds

• Tartaric acid has two chirality centers and two

diastereomeric forms

• An achiral compound with chirality centers is

called a meso compound – it has a plane of

symmetry

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HỢP CHẤT MESO

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HỢP CHẤT MESO

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Physical Properties of Stereoisomers

• Enantiomeric molecules differ in the direction in

which they rotate plane polarized but their other

common physical properties are the same

• Daistereomers have a complete set of different

common physical properties

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Racemic Mixtures and Their Resolution

• A 50:50 mixture of two chiral compounds that are

mirror images does not rotate light: called a

racemic mixture.

• To separate components of a racemate: make a

derivative of each with a chiral substance that is

free of its enantiomer (resolving agent)

• This gives diastereomers that are separated by

their differing solubility

• The resolving agent is then removed

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Representation of Resolution through Separation

of Diastereomeric Derivatives

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RESOLUTION

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Resolutions by chromatography on chiral material

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Resolutions by chromatography on

chiral material

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KINETIC RESOLUTION

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Stereochemistry of Reactions:

Addition of HBr to Alkenes

• Many reactions can produce new chirality centers

• What is the stereochemistry of the chiral product?

• What relative amounts of stereoisomers form?

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Achiral Intermediate Gives

Racemic Product

• Addition via carbocation

• Top and bottom are equally accessible

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Mirror Image Transition States

• Transition states are mirror images and product is

racemic

Br

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Stereochemistry of Reactions:

Addition of Br2 to Alkenes

• Stereospecific: Forms racemic mixture

• Bromonium ion leads to trans addition

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Addition of Bromine to Trans 2-Butene

• Gives meso product (both are the same)

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Stereochemistry of Reactions:

Addition of HBr to a Chiral Alkene

• Gives diastereomers in unequal amounts

• Facial approaches are different in energy

Trang 80

• A molecule that is achiral but that can become

chiral by a single alteration is a prochiral molecule

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Prochiral distinctions: faces

• Planar faces that can become tetrahedral are different

from the top or bottom

• A center at the planar face at a carbon atom is

designated re if the three groups in priority sequence

are clockwise, and si if they are counterclockwise.

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Prochiral distinctions, paired atoms or groups

• An sp3 carbon with two groups that are the same is

a prochirality center

• The two identical groups are distinguished by

considering either and seeing if it was increased in

priority in comparison with the other

• If the center becomes R the group is pro-R and

pro-S if the center becomes S

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Homotopic, Enantiotopic, Diastereotopic

When two hydrogens attached to a single

carbon, they can have three different types of

relationships:

 Homotopic

 Enantiotopic

 Diastereotopic

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Homotopic Hydrogens

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Enantiotopic Hydrogens

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Enantiotopic Hydrogens

 Tâm C mang 2 H và 2 nhóm thế khác nhau: Prochiral

 H a hoặc H b : Enantiotopic Hydrogens

 Thay H a hoặc H b bằng một nhóm thế khác sẽ tạo ra một tâm C*.

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Pro-R và pro-S tương đương về mặt hóa học:

► Phản ứng như nhau đối với tác nhân achiral nhưng

Enantiotopic Hydrogens

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FORMATION OF ENANTIOMERS

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FORMATION OF ENANTIOMERS

Trang 90

Diastereotopic Hydrogens

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Diastereotopic Hydrogens

Trang 93

Diastereotopic Hydrogens

Ha và Hb không tương đương hóa học

 Phản ứng khác nhau đối với tác nhân achiral.

Trang 94

FORMATION OF DIASTEREOMERS

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meso

Trang 98

• homotopic protons have the exact same

chemical shift.

• enantiotopic protons have the same chemical

shift in the vast majority of situations.

However, if they are placed in a chiral

environment (e.g a chiral solvent) they will

have different chemical shifts.

Homotopic, Enantiotopic, Diastereotopic

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TÂM NITROGEN BẤT ĐỐI XỨNG

 Sự khác nhau về năng lượng giữa hai cấu hình rất

Trang 101

 Sự khác nhau về năng lượng giữa 2 cấu hình của

hợp chất phospho là 30 kcal/mol

 Sự khác nhau về năng lượng giữa 2 cấu hình của

hợp chất lưu huỳnh là 35 kcal/mol

 Có thể cô lập 2 dạng đồng phân quang học

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BIOACTIVITY

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BIOACTIVITY

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CHIRAL DRUGS

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