theory of identification and algorithms for inference

... Works Theses and Dissertations 9-2-2014 Optimization algorithms for inference and classification of genetic profiles from undersampled measurements Belhassen Bayar Follow this and additional ... https://rdw.rowan.edu/etd Part of the Electrical and Computer Engineering Commons Recommended Citation Bayar, Belhassen, "Optimization algorithms for inference and classification of genetic profiles from undersampled ... energy and courage Trang 5AbstractBelhassen BayarOPTIMIZATION ALGORITHMS FOR INFERENCE AND CLASSIFICATIONOF GENETIC PROFILES FROM UNDERSAMPLED MEASUREMENTS 2014/06Nidhal Bouaynaya, Ph.D Master of

Ngày tải lên: 20/10/2022, 21:25

... understand-ing of the XA metabolism in the mosquito and offers a new possible target for the development of insecticides and⁄ or transmission blocking agents Results and Discussion Isolation of the ... pH of 7.8 and a comparable catalytic efficiency for both 3-HK and its immediate catabolic precursor kynurenine This study may be useful for the identification of 3-HK transaminase inhibitors of ... 3 Analysis of the bacterial expressed and purified Ag-HKT Analysis by SDS ⁄ PAGE of the protein content of the pET ⁄ Ag-hkt trans-formed E coli BL21(DE3) clarified lysate (A) and of the purified

Ngày tải lên: 16/03/2014, 23:20

... concentration of Neu5Ac of 0.615 mm, allowed us to estimate a value for the apparent Km for CTP and the apparent kcat for the Table 2 Apparent kinetic parameters determined for wild-type and mutant ... allow for equilibration of ligand⁄ receptor at the needle tip Heats of dilution for the ligands were determined in control experiments, and these were subtracted from the integrated data before ... the presence of a fixed concentra-tion of CTP of 0.154 mm, it was not possible to satu-rate the enzyme, and only an estimate of the kcat⁄ Km for Neu5Ac could be made from the gradient of the line

Ngày tải lên: 22/03/2014, 21:21

... that of adults (*P < 0.05, Duncan’s post hoc test, N ¼ 18 for 1–5 years, N ¼ 20 for 5–16 years, N ¼ 8 for 16–18 years and N ¼ 10 for > 18 years of age). Trang 5Functional properties of serum ... a number of samples from serum stored over longer periods and fresh serum and found no evidence of the appearance of additional bands after storage (data not shown) Fig 3 Isolation of TNX from ... against FNIII29–30 of TNX and the signal for the bands corresponding to the 75 and 140– 150 kDa species are approximately of equal strength Most likely, the FNIII29–30 repeats of TNX are not as

Ngày tải lên: 23/03/2014, 09:21

... further information on the nature of the sialylated glycoforms Comparison of the total ion electropherogram in negative ion mode (Fig 3A) and selective ion scanningfor m/z 290, specific for sialic ... spectra of O-deacylated LPS from the parent strain RM118 and RM118 lgtC, Sial-Lac glycoforms were observed in addition to the higher mass sialylated glycoforms As expected Sial-Lac-containing glycoforms ... elaborate detectable amounts of LPS containingsialylated glycoforms [21] The structure of the oligosaccharide chain of the sialylated glycoforms was determined from a series of selective excitation

Ngày tải lên: 23/03/2014, 21:21

... composition of the cell wall components of the target bacterium, and configu-ration of the substrate (peptidoglycan) The range of bacteria sensitive to lysis may be wide, as in the case of endolysin of ... specificity: it forms a bridge between an aspartic acid of the enzyme and an acidic N-terminal amino acid of the substrate [26] The affin-ity of bacteriophage T5 endolysin for d-glutamic acid of peptidoglycan ... from holin and endolysin The products of genes T5p045 (Rz ana-log) and T5p044 (Rz1 anaana-log) show a slight resem-blance to the products of genes PseT.3 and PseT.2 of bacteriophages T4 and RB32

Ngày tải lên: 30/03/2014, 02:20

... N-terminus and a 4Ig domain and DFRxxL motif at the proximal N-terminus [16,17] These structural differences may account for the differ-ential functioning of the MLCK isoforms However, the functions of ... fibers were of small size and irregular morphology, both typical of degenerative pathology In order to assess the extent of functional degeneration of these mus-cles, the contraction force of EDL ... Fig 1 Prediction for a conserved aggrega-tion domain in the 4Ig region of L-MLCK and recombinant expression of MLCK vari-ants (A) The sequences of the N-terminal extension of L-MLCK were subjected

Ngày tải lên: 30/03/2014, 04:20

... Identification of herbicide-regulated genes Two forward and reverse SSH libraries were made from pooled digestive glands and gills of C gigas after 30 days of exposure to a herbicide cocktail of atrazine, ... total RNA was extracted from the digestive gland and gills of a pool of 10 control and 10 exposed Table 7 Summary of the statistical test (Student test) performed on gene expression in the atrazine ... Both forward and reverse subtracted libraries were made on 2 lg of mRNA extracted from the 10 oysters collected after 30 days of exposure and pooled for RNA extraction mRNA from the gill and the

Ngày tải lên: 30/03/2014, 15:20

... Laboratory of Networking and Switching Technology, Beijing University of Posts and Telecommunications, P.O Box 145, Beijing 100876, China 2 Key Laboratory of Network and Information Attack and Defence ... Technology of Ministry of Education, Beijing University of Posts and Telecommunications, Beijing 100876, China 3 National Engineering Laboratory for Disaster Backup and Recovery, Beijing University of ... Trang 3where y i ,  θ i are the observed state and estimated parameter of x i and θ i , respectively, and k i and L i are positive constants. Proof From system2.3, we have ˙y i  gix fixθi y

Ngày tải lên: 21/06/2014, 16:20

... computation of various signal processing transforms, such as the FFT, DCT, and wavelet transforms Some efforts have focused on special architectures for the fast computation of some of these transforms For ... units for each of the transformed symbols or coefficients (expressed as bits for symbol or bits for pixel for the image case, simply denoted as bpp) A lower value of the entropy on a set of transformed ... have conducted a study of the software and hardware needs of the 3D wavelet transform [14] They have centered their study on the classic wavelet transform and conducted a set of trials on an SGI

Ngày tải lên: 22/06/2014, 19:20

... energy) and each of the κ, τ m, and τrms for comparison purposes While the corre-lation coefficients are usually low for most channel models, relatively larger values ofρ τ m,τrms andρsp,κ for certain ... parametersk1(2)andk3(2)are the weights for the NLOS and LOS measurements, respectively, Trang 9andk(2)2 is the weight for the ambiguity region when the like-lihood value falls in betweenΔ1andΔ2 For the ... the possible MT positions for each FT in topology-1, where FT1 has an NLOS bias of 3 m For all the HWS algorithms, we use andΔ2=3 In Figures8and9, simulation results for the average lo-calization

Ngày tải lên: 22/06/2014, 19:20

... dimensions ofY w andK w are the same The matrixY w is a linear mixture ofY LL3andWpub 1 (8), while the matrix Kw is a linear mixture of YLL3 andWpub 2 (9) We therefore have a total of three sourcesYLL3,Wpub ... can be used for identification pur-pose We obtainM by concatenating the public keys of the buyer and seller of the watermarked image The seller calcu-lates the hash ofM to get H(M) and generates ... decomposition of the intermediate-watermarked image I ∗ is performed and the public watermark is embedded in theLL subband If the image I ∗ is of dimensionN × N, then the size of the public watermark

Ngày tải lên: 22/06/2014, 23:20

... the rein-troduction of infection Materials and methods The study consisted of 2 parts: an observational study of affected and control farms, and a sur-vey of pig dealers and transport companies ... overview of the location of the 3 Cantons and the ratio of case and control farms per dis-trict A total of 103 farms were infected with EP and 4 farms with APP This resulted in an an-nual incidence of ... Regions of Switzerland – Identification and Quantification of Risk Factors By R Hege 1 , W Zimmermann 2 , R Scheidegger 3 , and K.D.C Stärk 1 1 Swiss Federal Veterinary Office, 2 Department of Clinical

Ngày tải lên: 12/08/2014, 15:20

... well as data standardised to have a mean of 0 and a standard deviation of 1 within each sex and population (see below) Trang 7Table II Means and standard deviations for body mass and composition ... transformed to have a mean of 0 and a standard deviation of 1 within each sex and population (i.e., by subtracting the mean and dividing by the standard deviation of the appropriate sex and population) ... estimate of the location of the QTL Mean body mass and the absolute additive effect of the QTL differed between the two lines (Tabs II and III) and therefore the raw 10-week body mass data were transformed

Ngày tải lên: 14/08/2014, 13:22

... 1CHARACTERIZATION AND EVALUATIONOF RNA STRUCTURE PREDICTION ALGORITHMS FOR HIGH PERFORMANCE SYSTEMS S P T KRISHNAN (M.Sc., National University of Singapore) A THESIS SUBMITTED FOR THE DEGREE OF DOCTOR OF PHILOSOPHY ... free energy change for each motif depends on the se-quence of the motif and of its closest base pairs The model and parameters ofminimal energy for different nucleotide pairs and loop regions were ... single-stranded the base pairs occur between cleotides of the same strand In case of DNA the purpose of forming base pairs nu-is primarily to replicate the genetic material for preservation and gene

Ngày tải lên: 10/09/2015, 08:34

... 14693–14698 Van Hoof, C., Ingels, F., Cayla, X., Stevens, I., Merlevede, W & Goris, J (1995) Molecular cloning and developmental regulation of expression of two isoforms of the catalytic subunit of protein ... and Xenopus lysates, which recognises the PR65 a and b isoforms equally well The best anti-C monoclonal was found to be F2 6A10, and it recognizes PP2AC in rabbit, mouse and Xenopus oocytes and ... were performed on about 1.5 lg of total RNA of prophase X laevis oocytes with U of AMVreverse transcriptase (5¢/3¢RACE kit, Roche) For the first strand cDNA synthesis, to amplify 5¢ ends of XN73,...

Ngày tải lên: 08/03/2014, 08:20

... Influences of temperature and pH on enzyme activity For the determination of the optimal temperature of the enzyme, the reaction was carried out at 25, 30, 35, 40, 45, 50, 55, 60, 65 and 70 °C and the ... negative of hydrolysis for gelatin and starch Therefore, according to all above analysis results, the strain Iso1 was clearly a strain of V paradoxus Cloning and nucleotide sequencing analysis of the ... at 40 °C for 20 The amount of D-amino acids produced was determined by the Chirobiotic T HPLC method and the appropriate D-amino acids were used as the standards RESULTS Identification and phylogenetic...

Ngày tải lên: 08/03/2014, 16:20

... internal control for RT-PCR PCR conditions were as follows: one cycle of 94 °C for min, 32 cycles of 94 °C for 30 s, 54 °C for 30 s and 72 °C for 30 s, followed by one cycle of 72 °C for PCR products ... expression of T-bet has been seen within a wide variety of tissues and cells in the Ginbuna crucian carp [27] and, in mammals, in the lung tissue of mouse and spleen and thymus of human and mouse ... Cloning and sequencing Initially, PCR was performed using the cDNA prepared above, with primers zfstat6-F1, zfstat6-R1, zfstat6-F2 and zfstat6-R2 for stat6, zftbet-F1 and zftbet-R1 for t-bet, and...

Ngày tải lên: 16/02/2014, 09:20

... properties of SmSmad1 and SmSmad1B as described above However, in the presence of SmSmad4 and the active mutant form of TbRI, both SmSmad2 and SmSmad4 interacted with GCN5, indicating the formation of ... this table for designating the extent of the protein interactions: the growth rate of cotransformed Y190 yeast colonies (activation of HIS3 reporter); the duration of the development of blue color ... of SmSmad2 and SmSmad4 and resulted in the formation of a stable and functional Smad complex [6,7] The above results are consistent with the report that human GCN5 interacts with both TGFb- and...

Ngày tải lên: 18/02/2014, 16:20

... Cloning of sipU Cloning of sipU Cloning of sipU Cloning of sipU Cloning of sipU Cloning of sipU Cloning of sipU Cloning of sipU Cloning of sipV Cloning of sipV Cloning of sipV Cloning of sipV ... Cloning of sipV Cloning of sipV Cloning of sipV Construction of pOpacVh Construction of pOpacVh Cloning of sipW Cloning of sipW Cloning of sipW Cloning of sipW Cloning of sipW Cloning of sipW ... Construction of pOpacWh Construction of pOpacWh Construction of pOpacSh Construction of pOpacSh Construction of pOpacTh Construction of pOpacTh Construction of pOpacBh Construction of pOpacBh Construction...

Ngày tải lên: 21/02/2014, 03:20