identification and interpretation of clusters from dendrogram

... one of the characterized miRNAs exhibited pronounced difference in the expression levels between 15 and 20 WAF, 17 up-regulated and 44 down-regulated Expression profiles of 12 conserved and 10 ... LAR, and ANR Expression patterns of these genes were analyzed in fruits of CPCNA and JPCN persimmon, which showed that transcript levels of most genes were lower in JPCNA than in CPCNA from middle ... S2) from a transcriptome of ‘Eshi No 1’ composed of 83,898 persimmon unigenes [10] A number of the miRNAs have multiple targets, indicating the diversity of these miRNAs The potential targets of

Ngày tải lên: 26/05/2020, 23:33

... time-of-flight tandem mass spectrometry (HPLC-ESI-QTOF-MS/MS) for the identification and characterization of quercetin, kaempferol, ellagic acid and their derivatives in ethanolic extracts of Phyllanthus ... acid and oleanolic acid, respectively and confirmed by comparison of RT and MS/MS spectra with their standards (Table 3) 4 Discussion Trang 10Most of the qualitative and quantitative analyses of ... extracts of P amarus samples collected from three different locations [35] HPLC-ESI-QTOF-MS/MS facilitates the identification and characterization of known and unknown compounds on the basis of their

Ngày tải lên: 04/12/2022, 10:35

... 144 Figure 6.4 C and D Correlation of IgE antibodies between Sui m 5.01 and 5.02 (C) and between Sui m 5.01 and Sui m 21 (D) 145 Figure 6.5 SDS-PAGE profile of a panel of Group 5 and Group 21 proteins ... derived from Trang 36pollen, fungi, mites, endothelial tissues and dander from pets, venom from insects and foods such as egg, milk, fruits, nuts and fish (Kerkhof et al., 2003; Burge and Rogers, ... Trang 1Identification and Characterization of Novel Group 5 and Group 21 Allergens from Dust Mite and IgE Binding Epitope Mapping of Blo t 5 Gao Yunfeng National University of Singapore

Ngày tải lên: 14/09/2015, 12:44

... Institute of Biotechnology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet Road, Cau Giay District, Ha Noi 2 Department of Science and Technology, Ministry of Industry and Trade, ... Trang 1IDENTIFICATION AND CHARACTERIZATION OF A PURPLE NONSULFUR BACTERIUM ISOLATED FROM COASTAL AREA OF HAI PHONG FOR USING IN PRODUCTION OF UNSATURATED FATTY ACID (OMEGA ... (vaccenic acid) is discovered in the cell of PNSB with high rate (65-82 % of total fatty acids) [10] From 25 strains of purple nonsulfur bacteria isolated from mud and waste water samples collected

Ngày tải lên: 14/01/2020, 07:44

... pattern of Nona Bokra and Pokkali [50], CSR23, CSR10 and SR 26B [31], Hasawi and SR26B [51] and susceptible IR36 and IR64 [52] Cluster II was consisted of two tolerant genotypes FL478 and Kala ... mapping [10,11] and identification and characterization of important trait related QTL [12-14] Traditional SSR markers developed from random genomic sequences have uncertainty of linkage with ... relationship between number of reiteration of a SSR motifs and its frequency To survey the trend of distribution of SSR loci in candidate gene sequences, the location of motifs were thoroughly

Ngày tải lên: 26/05/2020, 21:00

... effects against α-glucosidase and α-amylase of the flavonoids-rich extract from Scutellaria baicalensis shoots and interpretation of structure–activity relationship of its eight flavonoids by a refined ... development and pro-gression of diabetes [45] Abnormally high levels of free radicals and simultaneous decline of antioxidant defense mechanisms could lead to damage of cellular organelles and enzymes, ... grade) were bought from Beijing Chemical Factory, and purified water was from a mili-Q system (Millipore, Billerica, MA) Plant materials and extraction of flavonoids Shoots of annual S baicalensis

Ngày tải lên: 29/05/2020, 13:53

... recall of 0.4342, a precision of 0.3736, and an F-Score of 0.4016, with the FPR=0.01 graph performing best The ENCODE-motif dataset has a recall of 0.2051, a precision of 0.2282, and an F-Score of ... discerning and exploring TF-TF clusters and interactions Here, we demonstrate the usefulness of such a proximity-based graph clustering method for the identifi-cation, exploration, and application of ... the structure of DNA itself, or indirectly, by binding to and influencing other TFs [1] The transcriptional regu-lation brought about by TFs is crucial to the health of the cell and of the organism,

Ngày tải lên: 25/11/2020, 16:30

... Trang 1MINISTRY OF EDUCATION AND TRAININGNONG LAM UNIVERSITY-HO CHI MINH CITYFACULTY OF BIOLOGICAL SCIENCESIN SILICO IDENTIFICATION AND CLONING OF A DEFENSIN GENE FROM THE GENOME OF THE BLACK SOLDIER ... 2MINISTRY OF EDUCATION AND TRAININGNONG LAM UNIVERSITY-HO CHI MINH CITYFACULTY OF BIOLOGICAL SCIENCESGRADUATE THESIS IN SILICO IDENTIFICATION AND CLONING OF A DEFENSIN GENE FROM THE GENOME OF THE ... Jn silico identification of candidate defensin genes from BSF genomes Content 2: Primer design and PCR amplification of a target defensin gene from flygenomic DNA Content 3: Cloning of the PCR

Ngày tải lên: 11/12/2024, 12:31

... application of this technology for the identification of viral species and their genes in other virus families Finally, the software and Web site that we have developed to derive CODEHOP PCR primers from ... previously unknown DNA polymerase sequences from members of the alpha, beta and gamma subfamilies of herpesviruses [8], and have discovered three homologs of the Kaposi's sarcoma-associated herpesvirus ... infections and/or subsequent virus recombination events have occurred [1] Therefore, the development of tools for the detection of viruses, the characterization of their genomes and the study of their

Ngày tải lên: 18/06/2014, 22:20

... standardization and testing were carried out on sepa-rate sets of images, two for training and 12 for testing The number of samples used for standardization was 4, 7 and 10 for the A, B, and C test ... determination of the invariant characteristics of the projection of a given virus structure The template for the virus particle is created on the basis of information obtained from a small training set of ... micrographs and is then employed to classify and quantify similar structures of interest in an unlimited number of electron micrographs by a process of correlation Results: Practical application of the

Ngày tải lên: 20/06/2014, 01:20

... ‘chemical genetic’ approach of identifying and studying the mechanism of action of small-molecule ago-nists (and antagoago-nists), we hoped to uncover some of the complexities of the Hh-signaling system ... concentrations of Hh-Ag 1.3 (n = 6 explants) Error bars represent standard deviations (c-n) Confocal images of representative explants cultured in the presence of different concentrations of the agonist and ... exhibited overgrowth of the headfolds and hindbrain, reminiscent of to show fused ventral lips of the cephalic folds, and a single continuous optic vesicle, indicating lack of a clearly defined

Ngày tải lên: 06/08/2014, 18:20

... [17,18] These gene families form tandem gene clusters and have experienced copy number changes and complex local rearrangements Because the dynamics of gene clusters make it difficult to unambiguously ... unitary pseudogenes from the tandem gene families are indicated by gray bars Inset: box plot of the number of human unitary pseudogenes in each paralogous gene set and the number of members in each ... existence of polymorphic disruptive sites in those genes as the genomic DNA and the mRNA were obtained and sequenced from different individuals After careful examination of both the genomic and the

Ngày tải lên: 09/08/2014, 20:21

... 33,001 unigenes and 973.34 Mbp of genomic sequences from G max, 18,098 unigenes and 105.5 Mbp of genomic sequences from M truncatula, and 30,579 unigenes and the whole genome from Arabidop-sis ... help in the development of an accurate and complete structural annotation of the common bean genome, a valid tran-scriptome map, and the identification of the genetic basis of agriculturally important ... old seedlings from the genotype G19833 were exposed to high and low phos-phorus (five and 1,000μmol/L) respectively and the poly (A+) RNA derived from total shoot and root RNA from plants in

Ngày tải lên: 11/08/2014, 11:21

... amino-acid sequence of CaNDR1a (Figure 4), with resi-dues S189 and G190 being strongω-site candidates (with P-values of 2.48 × 10-6and 2.76 × 10-5, respectively) Furthermore, CaNDR1a and its Arabidopsis ... identified and cloned from leaves of coffee plants One of the candidate coding sequences was then expressed in the Arabidopsis knock-out null mutant ndr1-1 Upon a challenge with a specific strain of ... the HarvEST© Coffea database resulted in the identification of a candidate contig from Coffea canephora[GenBank: DV705409.1] The deduced protein sequence shares a high percentage of identity/

Ngày tải lên: 11/08/2014, 11:21

... Lhcb1 isoforms of several plants, and Thr39, which is not conserved across Lhcb1 isoforms of other plants, but is present as a non-phosphorylated residue in the Lhcb1 isoforms of Arabidopsis and ... patterns: 85% pSer and 10.6% pThr [22] and 88% pSer and 11% pThr [33] in Arabidop-sis; and 86% pSer and 12.7% pThr in M truncatula [49] Only 1.2% (2) of the phosphorylation events of these phos-phopeptides ... Discussion A series of differential expression profiling analyses of the induction, maintenance, and release of bud dormancy made it possible to identify a large set of dormancy-related candidate genes

Ngày tải lên: 11/08/2014, 11:21

... mM EDTA, 1.5 M NaCl), in the presence of 0.1 mg of proteinase K and mg of lysozyme and incubated at 37°C for 30 Lysis was completed by adding ml of 20% SDS and incubated for h at 65°C with shaking ... Randomly selected transposon carrying protease negative mutants were sequenced and alignment of these sequences lead to the identification of the protease open reading frame (ORF) Analysis of ... 65 and 85% of the maximum activity at the temperature range of 35°C and 55°C respectively Thermal stability of the purified AS-protease was estimated at Figure Multiple sequence alignment of...

Ngày tải lên: 21/06/2014, 05:20

... contains eight distinct epitopes and most of these differ from the corresponding regions of other legume and tree-nut allergens [41] Identification of specific allergens and their IgE binding epitopes ... increase started from 4-8 DAA and in most cases the maximum was reached between 33 and 38 DAA Proteomic identification of NLL conglutins and IgE binding conglutins With the availability of full-length ... Vierucci A, Duranti M: One- and two-dimensional electrophoretic identification of IgE-binding polypeptides of Lupinus albus and other legume seeds Journal of Agricultural and Food Chemistry 2005,...

Ngày tải lên: 11/08/2014, 11:21

... development and provision of accessible information and resources for staff and patients and their families 2) The development and provision of a monitoring checklist to record assessment and prescription ... organisation of effective court liaison and diversion arrangements and the services needed to support them The focus was expanded to include a more comprehensive consideration of the ‘offender pathway’ and ... Training and Education and Community Payback) and monitor their clients’ progress and, while there are national standards, each Trust and is encouraged to tailor responses to local needs and priorities...

Ngày tải lên: 11/08/2014, 16:23

... Page 12 of 12 38 Slimestad R, Verheul MJ: Review of flavonoids and other phenolics from fruits of different tomato (Lycopersicon esculentum Mill.) cultivars Journal of the Science of Food and Agriculture ... were sown on rock wool and given Hoagland nutrient solution containing 15 mM NO [31] RNA and DNA used to identify coding sequence and introns of the F3’5’H gene was isolated from plants grown in ... (forward and reverse) and μl cDNA Standard cycling conditions (2 at 50°C, 10 at 95°C and 40 cycles altering between 15 s at 95° C and at 60°C) were used for product formation Forward and reverse...

Ngày tải lên: 12/08/2014, 03:21

... Anticoagulant activity of pooled fractions Chapter Three Figure 3.1: Purification of BF-AC1 and BF-AC2 from the venom of B fasciatus Figure 3.2: ESI-MS profile of BF-AC1 (A) and BF-AC2 (B) Figure ... Discussion and Conclusion Chapter Identification and characterization of novel inhibitors on extrinsic tenase complex from Bungarus fasciatus (banded krait) Venom 3.1 Introduction 3.2 Materials and ... Kang Tse Siang, Professor R Manjunatha Kini and Associate Professor Go Mei Lin for their constant encouragement and scientific input throughout my candidature Dr Kang and Prof Kini have provided...

Ngày tải lên: 09/09/2015, 11:08