... model compiler HMM-CONVERTER and examine their respective practical merits for three small example models Conclusions: Bioinformatics applications employing hidden Markov models can use the two algorithms ... than the corresponding default algorithms for Viterbi training and stochastic EM training Background Hidden Markov models (HMMs) and their variants are widely used for analyzing biological sequence ... example models, we would thus recommend using stochastic EM training for parameter training Conclusion and discussion A wide range of bioinformatics applications are based on hidden Markov models
Ngày tải lên: 12/08/2014, 17:20
... parameters of hidden Markov models using stochastic expectation maximization (EM) training and Viterbi training Tin Y Lam, Irmtraud M Meyer* Abstract Background: Hidden Markov models are widely ... model compiler HMM-CONVERTER and examine their respective practical merits for three small example models Conclusions: Bioinformatics applications employing hidden Markov models can use the two algorithms ... than the corresponding default algorithms for Viterbi training and stochastic EM training Background Hidden Markov models (HMMs) and their variants are widely used for analyzing biological sequence
Ngày tải lên: 02/11/2022, 09:28
learning to automatically detect features for mobile robots using second order hidden markov models
... 3section 6 We give some conclusions and perspectives in section 7 2 Second-order Hidden Markov Models In this section, we only present second-order Hidden Markov Models in the special case of multi ... propose a new method based on Hidden Markov Models to interpret temporal sequences of sensor data from mobile robots to automatically detect features Hidden Markov Models have been used for a ... second-order extension of the learning algorithm (Baum-Welch algorithm) and the recognition algorithm (Viterbi algorithm) A very complete tutorial on first order Hidden Markov Models can be found in
Ngày tải lên: 04/12/2022, 15:14
Luận án tiến sĩ: Enhancements to hidden Markov models for gene finding and other biological applications
... correct and incorrect annotations Such models (hidden Markov support vector machines (Altun et al., 2003), convex hidden Markov models (Xu et al., 2005)) are inspired by maximum margin training and ... models are hidden Markov models, with a variety of topology restrictions to encode back- ground knowledge about structure of the genes We train these probabilistic models on a training set, and ... a hidden Markov model for promoter and transcription start site identification Hajarnavis et al established probabilistic models for polyA signals and 3' UTR compositions Integrating such models
Ngày tải lên: 02/10/2024, 02:13
Báo cáo khoa học: "Lexically-Triggered Hidden Markov Models for Clinical Document Coding" pot
... the text and produce two types of features: features related to the candidate code in question and features related to other candi- date codes of the document. Negated, hypothetical, and family-related ... compliance and rev- enue. Perspectives in Health Information Manage- ment, CAC Proceedings, Fall. M. Collins. 2002. Discriminative training methods for Hidden Markov Models: Theory and experiments ... Computational Linguistics, pages 742–751, Portland, Oregon, June 19-24, 2011. c 2011 Association for Computational Linguistics Lexically-Triggered Hidden Markov Models for Clinical Document Coding Svetlana
Ngày tải lên: 07/03/2014, 22:20
parametric hidden markov models for gesture recognition
... and Hidden Markov models (HMMs) are two techniques based on dynamic programming Darrell and Pentland [12] applied DTW to match image template correlation scores against models to recognize hand ... MOTIVATION ANDPRIORWORK 2.1 Using HMMs in Gesture Recognition Hidden Markov models and related techniques have been applied to gesture recognition tasks with success Typically, trained models of ... Trang 1Parametric Hidden Markov Modelsfor Gesture Recognition Andrew D Wilson, Student Member, IEEE Computer Society, and Aaron F Bobick, Member, IEEE Computer Society
Ngày tải lên: 24/04/2014, 13:16
Báo cáo sinh học: " Research Article Employing Second-Order Circular Suprasegmental Hidden Markov Models to Enhance Speaker Identification Performance in Shouted Talking Environments" potx
... Suprasegmental Hidden Markov Models (LTRSPHMM1s), Second-Order Left-to-Right Suprasegmental Hidden Markov Models (LTRSPHMM2s), and First-Second-Order Circular Suprasegmental Hidden Markov Models (CSPHMM1s) ... on each of Second-Order Hidden Markov Models (HMM2s) [8], Second-Order Circular Hidden Markov Models (CHMM2s) [9], Suprasegmental Hidden Markov Models (SPHMMs) [10], and gender-dependent approach ... left-to-right hidden Markov models can be found in the references [21,22] 4.2 Second-Order Left-to-Right Suprasegmental Hidden Markov Models Second-Order Left-to-Right Suprasegmen-tal Hidden Markov Models
Ngày tải lên: 21/06/2014, 16:20
Báo cáo hóa học: " Research Article A Statistical Multiresolution Approach for Face Recognition Using Structural Hidden Markov Models" pptx
... Face Recognition Using Structural Hidden Markov Models P Nicholl, 1 A Amira, 2 D Bouchaffra, 3 and R H Perrott 1 1 School of Electronics, Electrical Engineering and Computer Science, Queens University, ... (2D-HMM), however, recogni-tion accuracy is lower as a result The hierarchical hidden Markov models (HHMMs) introduced in [19] and applied in video-content analysis [20] are capable of modeling ... horizontal coordinate x and the vertical coordinatey The parameters u and v define the orientation and scale of the Gabor kernel,·defines the norm operator, andσ is related to the standard deviation
Ngày tải lên: 22/06/2014, 06:20
USING PARALLEL PARTICLE FILTERS FOR INFERENCES IN HIDDEN MARKOV MODELS
... model andthe notations associated with such models.Definition 2.1.1 A hidden Markov model comprises of a hidden Markov state cess {Xn: n ≥ 1} described by its initial density X1 ∼ µθ(·) and transition ... (SMC) methodfor the estimation of the likelihood function and latent states in a hidden Markovmodel A hidden Markov model (HMM) is a class of models with a wide range of realapplications The application ... where a(·) and b(·) are measurable functions and {k}k≥0 and {νk}k≥0 are mutuallyindependent and identically distributed sequences of random variables that are inde-pendent of X0 If a(·) and b(·)
Ngày tải lên: 09/09/2015, 10:15
Hidden markov models applications to financial economics
... 8Dedication v4 Markov Chains and the Term Structure of Interest Rates 6 6 Hidden Markov Models and Hidden Markov Experts 13 Trang 94 INTERPLAY BETWEEN INDUSTRIALTrang 102 Markov Switching Heteroscedasticity ... of the hidden states partic-Thus, a hidden Markov model is a standard Markov process mented by a set of measurable states and several probabilistic relationsbetween those states and the hidden ... will begin with a simple example to help readers stand the basic concepts in Hidden Markov Models (HMMs) and howthey relate to the state space models (SSMs) Suppose we observe a se-ries of counts
Ngày tải lên: 08/01/2020, 09:52
Ứng dụng hidden markov models trong nhận dạng hành động con người dựa trên cấu trúc acclaim
... DỤNG MÔ HÌNH MARKOV ẨN TRONG NHẬN DẠNG HÀNH ĐỘNG CỦA CON NGƯỜI TRÊN CẤU TRÚC ACCLAIM 2.1 MÔ HÌNH MARKOV ẨN 2.1.1 Mô hình Markov (Markov Model-MM) Mô hình Markov còn gọi là mô hình Markov điển ... hình Markov ẩn - Các tài liệu về phương phápvà thuật toán nhận dạng - Tìm hiểu, nghiên cứu về HMM (Hidden Markov Models) 4.2 Phương pháp thực nghiệm - Xây dựng chương trình ứng dụng HMM (Hidden ... trúc mạng nơ ron: mạng truyền thẳng và mạng lan truyền ngược e Mô hình Markov ẩn (Hidden Markov Model-HMM) HMM là quá trình Markov với các tham số không biết trước, nhiệm vụ xác định các tham số
Ngày tải lên: 26/05/2020, 17:35
Replicability analysis in genome-wide association studies via Cartesian hidden Markov models
... studies via Cartesian hidden Markov models Pengfei Wang and Wensheng Zhu* Abstract Background: Replicability analysis which aims to detect replicated signals attracts more and more attentions in ... a homogeneous Markov chain to a nonhomoge-neous Markov chain or even a Markov random field Second, the EM algorithm for estimating the parameters of CHMM is a heuristic algorithm and may lead ... usually assume that f10and f20are the densities of the standard normal distribution N (0, 1), and f11 and f21are the densities of the normal distributions N μ1,σ2 1 and μ2,σ2 2 , respectively
Ngày tải lên: 25/11/2020, 13:31
Predicting enhancers in mammalian genomes using supervised hidden Markov models
... liver E12.5 and E14.5 and mouse embryo lung E14.5 and E16.5 ATAC-seq and HM ChIP-seq data from liver and lung samples were obtained from ENCODE [3] We down-loaded ESC HM and TF ChIP-seq and Methylated ... designed enhancer hidden Markov model(eHMM), a supervised hidden Markov model con-sisting of three modules, each being learned on a des-ignated training set for enhancers, promoters, and back-ground, ... and the predicted regions Finally, we show how to use hidden Markov models in a supervised fashion with genomic data, and how different models learned on various training sets can be combined
Ngày tải lên: 25/11/2020, 13:31
reinforcement learning and dopamine in schizophrenia dimensions of symptoms or specific features of a disease group
... Rescorla–Wagner-Models clearly provide a model-free account of reinforcement learning, the Double-Update- and the Hidden–Markov-Models can both be regarded as a model-based account of reinforcement learning ... computational modeling of learning – ranging from standard Rescorla–Wagner-Models to Double-Update-Rescorla–Wagner-Models (Box 1) and finally belief-based Hidden–Markov-Models (78) – to the data ... behavioral and neuroimaging research in schizophrenia and focus on studies that implemented reinforcement learning models In addition, we dis-cuss studies that combined reinforcement learning with
Ngày tải lên: 04/12/2022, 16:11
recent applications of hidden markov models in computational biology
... genomic annotation Key words: Hidden Markov Models, sequence alignment, homology detection, protein structure prediction, gene prediction Introduction Hidden Markov Models (HMMs), being computation-ally ... positions are designed a and d;they are separated by two positions b and c; and b and c are separated by three positions (e, f, and g) in turn that are occupied by mainly hydrophilic and often charged ... developments and applications of Hidden Markov Models (HMMs) to various problems in computational biology, including multi-ple sequence alignment, homology detection, protein sequences classification, and
Ngày tải lên: 04/12/2022, 16:13
Luận án tiến sĩ: Evidence combination in hidden Markov models for gene prediction
... we use hidden Markov models both as a basis of our gene finder and to characterize the conservation patterns of similar coding regions In this section, we define hidden Markov models and explain ... H and generate the sequence X is the following product of the model parameters: m—I1 Pr(H, X) = Shy (1 Chi ay” ơ Cha 2m" (1.1) ¡=1Hidden Markov models for sequence annotationHidden Markov models ... sequence composition becomes an important factor in intron recognition.Hidden Markov models and their algorithms 2 0 -004 6A hidden Markov model (HMM) is a generative probabilistic model for modeling
Ngày tải lên: 02/10/2024, 02:13
Báo cáo nghiên cứu khoa học: Studying deep reinforcement learning and application for trading on Vietnamese stock market
... helping investors optimize profits and risks Technological aspects of AI are gradually being applied such as machine learning, reinforcement learning, deep learning and natural language processing ... (IJCNN) (pp 1-8) IEEE [6] Van Otterlo, M., & Wiering, M (2012) Reinforcement learning and markov decision processes In Reinforcement learning: State-of-the-art (pp 3-42) Berlin, Heidelberg: Springer ... losses and ensure long-term viability.METHODOLOGYBased on the idea of applying Deep Reinforcement learning to the stock trading problem (Adaptive Stock Trading Strategies with Deep Reinforcement Learning
Ngày tải lên: 08/10/2024, 02:12
Hidden markov models
... Trang 1Hidden Markov ModelsAnkur Jain Y7073 Trang 2What is Covered• Observable Markov Model • Hidden Markov Model • Evaluation problem • Decoding Problem ... DryRain 0.4 0.4 Example of Hidden Markov Model Trang 9• Two states : ‘Low’ and ‘High’ atmospheric pressure.• Two observations : ‘Rain’ and ‘Dry’ Example of Hidden Markov Model Trang 10•Suppose ... Trang 6Hidden Markov models.• The observation is turned to be a probabilistic function (discrete or continuous) of a state instead of an one-to-one correspondence of a state •Each state randomly
Ngày tải lên: 14/03/2014, 23:47
Báo cáo hóa học: " Offline Signature Verification Using the Discrete Radon Transform and a Hidden Markov Model" doc
... automatically authenticates offline handwritten signatures using the discrete Radon transform (DRT) and a hidden Markov model (HMM) Given the robustness of our algorithm and the fact that only global ... when only genuine signatures are used as training data Hidden Markov models El-Yacoubi [17] uses HMMs and the cross-validation princi-ple for random forgery detection A grid is superimposed on each ... signasigna-tures, 10 casual forgeries, and 10 skilled forgeries per writer An FRR of 2.83% and an FAR of 1.44%, 2.50%, and 22.67% are reported for random, casual, and skilled forgeries, respectively
Ngày tải lên: 23/06/2014, 01:20
DECENTRALIZED AND PARTIALLY DECENTRALIZEDMULTI-AGENT REINFORCEMENT LEARNING
... trial-and-error method and the ultimate goal of selectingthe most optimal action are two important features of reinforcement learning 1.1 Reinforcement Learning ModelThe reinforcement learning ... to solve the 𝑛-armed banditproblem un-1.3 Learning AutomatonThe Learning Automaton was modeled based on mathematical psychology models of animal and child learning The learning automaton attempts ... their be-havior and learning optimal strategies as the system evolves We use ReinforcementLearning paradigm for learning optimal behavior in Multi Agent systems A rein-forcement learning agent
Ngày tải lên: 24/08/2014, 10:47
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