Strasser2 1Department of Biophysics and Radiobiology, Faculty of Biology, University of Sofia, Sofia, Bulgaria,2Bioenergetics Laboratory, Department of Plant Biology, University of Geneva,
Trang 1J1–Photosynthetic Light Harvesting and Reaction Center
Complexes
J1-001
Cocrystals of photosystem I with its soluble
natural electron acceptor ferredoxin at 4 A
resolution
R Fromme, H Yu, I Grotjohann and P Fromme
Department of Chemistry and Biochemistry, Arizona State
Univer-sity, Tempe, AZ, USA E-mail: Raimund.Fromme@asu.edu
We measured cocrystals of the membrane protein Photosystem I
with its soluble electron acceptor ferredoxin for the first time at the
ALS (Berkeley, CA) Previous data collected at our home source
and at other synchrotron sources showed crystals with very high
mosaicity (2–5%) and a diffraction limit to 7–8 Aresolution This
first beamtime at ALS was very successful and may represent a
breakthrough for the determination of the crystal structure 110
crystals, grown under modified crystallization conditions, were
scanned and for the first time, crystals diffraction to 3.5 A were
observed These crystals have a different space group and unit cell
dimensions than all previous grown PSI-ferr cocrystals The space
group has been determined to be P21 with a = 214.5, b = 235.6,
c = 261.2 alpha = 90.0 beta = 100.47 gamma = 90.0 A full
data set (360 images with 1.5 min exposure/ image and 0.5
rota-tion/ image) was collected from one crystal, even if the long X-ray
exposure has limited the completeness of the higher resolution
data, being 99% complete at 4.0 A and 63% complete at 3.5 A
The mosaicity of the crystal was with 0.84% much lower than the
mosaicity of all previously measured crystals of the PSI-ferredoxin
supercomplex In addition to the native data set, two low
resolu-tion datasets on the iron edge and peak for MAD were collected to
7 A resolution These data sets were measured after the native data
sets on the same crystal with decreasing diffraction quality due to
X-ray damage Therefore the data evaluation was limited to 8–9 A,
which is not sufficient for MAD phasing based on the FeS clusters
in PS I and ferredoxin Preliminary phasing with Molecular
Replacement revealed that there are two trimers of the PS I
com-plex in the PS I-ferredoxin asymmetric unit, which corresponds to
a molecular mass of 2.1 million Da The actual resolution of the
ED map shows that experimental phases and improved native data
sets are essential for the unraveling of the structure of the PS
I-fer-redoxin complex We plan to collect native data sets from several
crystals of the new form, which can be merged to limited the X-ray
exposure of individual crystals during data collection
J1-002
Breaking biological symmetry in membrane
proteins: how PsaC evolved to orient
asymmetrically on the photosystem I core
J H Golbeck1, M Antonkine2and D Stehlik2
1Biochemistry and Molecular Biology; Chemistry, The
Pennsylva-nia State University, University Park, PA, USA,2Fachbereich
Physik, Freie Universita¨t, Berlin, Germany E-mail: jhg5@psu.edu
Photosystem I is particularly intriguing because the reaction center
core is a pseudo-C2-symmetric heterodimer that likely evolved
from a C2-symmetric homodimeric precursor This change was
accompanied by the recruitment of a bacterial dicluster ferredoxin,
now known as PsaC, which serves as the terminal electron
accep-tor The involvement of FA and FB in electron transfer lengthened
the time of charge separation, thereby ensuring a high quantum
yield The FX region on PsaA/PsaB is highly symmetric, yet PsaC
binds asymmetrically (i.e in one of two possible orientations) For
PsaC to bind asymmetrically, a number of alterations were neces-sary in the structures of both PsaC and the PsaA/PsaB heterodi-mer We have studied the assembly of these subunits by comparing the three-dimensional NMR solution structure of unbound PsaC (1K0T) with the atomic-resolution X-ray crystal structure of PsaC bound to the PS I reaction center This is the first instance in which bound and unbound three-dimensional structures are available for
a membrane-associated protein We found structural features, spe-cific to unbound PsaC in solution, which prevent binding of this protein to the PS I core in the incorrect orientation We propose that during binding to PS I core PsaC undergoes step-wise struc-tural change that assures its binding in the correct orientation Sim-ilar fundamental principles may have evolved in the assembly of membrane-associated subunits of other symmetrical complexes
J1-003 Supercomplexes of photosystem I and antenna proteins in green plants and cyanobacteria
R Kouril1, A Zygadlo2, P E Jensen2, N Yeremenko3,
H Matthijs3, H D’Haene4, J Dekker4and E Boekema1
1Department of Biophysical Chemistry, Groningen University, Groningen, The Netherlands,2Agricultural University, Copenhagen, Denmark,3University of Amsterdam, Amsterdam, The Nether-lands,4Vrije Universiteit Amsterdam, Amsterdam, The Nether-lands E-mail: e.j.boekema@rug.nl
Photosystem I (PSI) and Photosystem II (PSII) can form supercom-plexes with various types of antenna proteins One such protein is Light-harvesting complex II (LHCII) In plants it is bound in its tri-meric form to ditri-meric PSII In spinach and Arabidopsis thaliana most dimers bind 2–4 LHCII trimers We have characterized the PSI-LHCII complex from Arabidopsis membranes in state two by single particle electron microscopy at about 16 A˚ PSI binds one trimer at the site of the PsaL and PsaK subunits Cyanobacteria express large quantities of the Iron Stress Inducible protein IsiA under iron defici-ency IsiA can assemble into numerous types of single or double rings surrounding PS I These supercomplexes are functional in light-har-vesting, but empty IsiA rings are effective energy dissipators Electron microscopy studies on over 130 000 particle projections of these supercomplexes show that photosystem I trimers find 18 IsiA copies
in a single ring; whereas monomers may bind up to 35 copies in two rings The double rings are formed by inner rings of 12, 13 or 14 cop-ies and the outer ones of 19, 20 and 21 copcop-ies, respectively This shows that IsiA can form a remarkable large variety of ring-like structures Work on particles purified from mutants indicates that the PsaF and PsaL subunits facilitate the formation of closed rings around PSI monomers But these subunits are not obligatory compo-nents in the formation of PSI-IsiA supercomplexes
J1-004 Initial charge separation in photosystem II reaction centers identified with femtosecond mid-infrared spectroscopy
M.-L Groot1, N P Pawlowicz1, L J van Wilderen1, J Breton2,
I H van Stokkum1and R van Grondelle1
1Department of Physics and Astronomy, Vrije Universiteit, Amsterdam, The Netherlands,2CEA, Saclay, France
E-mail: rienk@few.vu.nl
In spite of the apparent similarity between the plant Photosystem
II reaction center and its purple bacterial counterpart, we show
Trang 2that the mechanism of charge separation is very different for the
two photosynthetic reaction centers Using femtosecond
visible-pump-mid-infrared probe spectroscopy in the region of the
chlo-rophyll ester and keto modes, between 1775 and 1585 cm)1, with
150 fs time resolution we show that the reduction of pheophytin
occurs on a 0.6–0.8 ps time scale, whereas P+, the precursor
state for water oxidation, is formed after ~6 ps We conclude
therefore that in the PS II RC the primary charge separation
occurs between the ‘‘accessory chlorophyll’’, ChlD1 and
pheo-phytin on the so-called active branch
J1-005
The primary light energy conversion in
bacterial reaction centers: coupling electron
transfer and nuclear motions
V A Shuvalov
Primary Processes of Photosynthesis, Institute of Basic Biological
Problems, Russian Academy of Sciences, Pushchino, Moscow
region Russian Federation E-mail: shuvalov@issp.serpukhov.su
The primary light energy conversion at photosynthesis occurs in
photoreaction center (RC) of photosynthetic bacteria and green
plants (photosystem I and II) In all known reaction centers the
primary electron donor is a (bacterio)chlorophyll dimer, P, and
the primary acceptor is a (bacterio)chlorophyll monomer
(bacter-ial and PSII RCs), BA, or dimer (PSI RCs) The primary charge
separation is observed within 2–10 ps and accompanied by
elec-tron transfer to the secondary elecelec-tron acceptors (pheophytin,
qui-none molecules and iron-sulfur centers) The nuclear wave packet
formed by 18-fs excitation on the P* potential energy surface in
native and mutant reaction centers (RCs) of Rhodobacter (Rb)
sphaeroideswas found to be accompanied by the nuclear motions
with frequency of 130–150 cm)1 inside of P* with the charge
transfer from PA to PB molecule The negative charge on PB - is
reversibly transferred to the P+BA- surface at 120, 380, etc
fem-tosecond (fs) delays (monitored by measurements of BA-
absorp-tion band at 1020–1028 nm) via a molecular pathway including
the water molecule at the position 55 (Rb sphaeroides) In the
absence of tyrosine M210 replaced by W or L the most simple
pattern of fs oscillations with seven periods of 230 fs in stimulated
emission from P* is observed Identical reversible oscillations are
observed in the 1020-nm band of BA- of the mutants showing the
absence of the stabilization of the state P+BA- The obtained
results are discussed in terms of electron transfer processes
coupled to the nuclear wave packet motions on the P*
poten-tial energy surface which are transferred to the product state
(P+BA-) The stabilization of P+BA- is suggested to occur due
to the motion of H+ in tyrosine O-H+ group These processes
seem to play a key role in the primary charge separation
J1-006
Structure of the purple bacterial LH1/RC
complex and its role within the photosynthetic
unit
A T Gardiner1, A W Roszak2, J Southall1, C J Law3,
R J Codgell1and N W Isaacs2
1
Laboratory of Microbial Photosynthesis, Department of
Biochem-istry and Molecular Biology, University of Glasgow, Glasgow, UK,
2
Laboratory of Protein Crystallography, Department of Chemistry,
University of Glasgow, Glasgow, UK,3L2-009, Department of
Chemistry and Environmental Science, University of Limerick,
Limerick, Ireland E-mail: atg3v@udcf.gla.ac.uk
In purple non-sulphur photosynthetic bacteria each LH1 is
intimately associated with a reaction centre (RC), in a fixed 1:1
stoichiometry, forming the so-called ‘‘core’’ complex If the RC is surrounded by a palisade of rigid a-helices from the LH1 com-plex, then how is the ubiquinol able to ‘‘escape’’ and diffuse to the cytochrome b/c1? This question has been answered, in part,
by the 4.8A˚ crystal structure LH1/RC ‘‘core’’ complex from Rhodopseudomonas palustris The RC is surrounded by an oval, rather than circular, LH1 complex consisting of 15 ba-pairs and their associated pigments The orientation of the long axis of the ellipse coincides with the long axis of the RC and allows the LH1 complex to wrap tightly around the RC The LH1 complex
is prevented from completely encircling the RC by a single trans-membrane helix (called W) Protein W replaces a ba-pair and is located out of register with the other 15 ba pairs Little is known about W but it is thought to be structurally equivalent to the Puf
X protein present in Rhodobacter (Rb.) sphaeroides and Rb cap-sulatusand appears to be associated with the LH1 complex facili-tating ubiquinol/ubiquinone exchange between the RC and the cytochrome b/c1complex W is located directly in front of the Qb
binding site in the RC and is therefore ideally placed to enable ubiquinol to exit This presentation will provide details of our current understanding of the structure and function of the purple bacterial antenna LH1/RC ‘‘core’’ complex
J1-007P Light stress-induced one-helix protein of the chlorophyll a/b-binding family associated with photosystem I
U B Andersson1,2, M Heddad1and I Adamska1,2 1
Department of Biochemistry and Biophysics, Stockholm Univer-sity, Stockholm, Sweden,2Department of Biology, University of Konstanz, Konstanz, Germany E-mail: ulrica@dbb.su.se The chlorophyll a/b-binding (Cab) protein family contains not only members composing the light-harvesting antennae but also several proteins associated with the photosystems that have other non-light-harvesting functions All Cab superfamily proteins are intrinsic membrane proteins consisting of one to four transmem-brane helices and they share a conserved motif in the first and third helix One subfamily of the Cab proteins constitutes the early light-induced proteins (Elips) that are proposed to partici-pate in protection against excessive light One member of the Elips family in Arabidopsis thaliana is the One-helix protein 2 (Ohp2), a 14 kDa protein with one predicted transmembrane helix The transcripts and protein of Ohp2 accumulate in higher light intensity but not in response to other stress conditions, such
as salt, oxidative, cold or heat stress UV-A irradiation affected the transcript level but not the protein level, suggesting that the amount of Ohp2 is controlled on both RNA and protein level Localization studies showed that Ohp2 is found exclusively in photosystem I (PSI) under low as well as high light conditions This is in contrast to other Elips investigated, which are associ-ated with photosystem II PSI was long believed not to suffer from photoinhibition, but recently it was found that high light in combination with cold stress caused severe damage to PSI We therefore suggest that Ohp2 has a protective role for PSI during light stress conditions
Trang 3Assembly of the heterodimeric
light-harvesting complex LHCI-730 depends on
amino acids in the second transmembrane
helix of the Lhca4 subunit
D Corbet and V H Schmid
Institute of General Botany, Johannes Gutenberg University,
Mainz, Germany E-mail: corbet@uni-mainz.de
Alignments of apoproteins of light-harvesting complexes (Lhc) of
photosystem (PS) I and PSII show considerable amino acid
sequence conservation in several regions Despite this similarity,
Lhc proteins of PSII form either monomers or trimers, and Lhc
proteins of PSI dimers To get insight into the amino acids
involved in formation of the heterodimeric LHCI-730 we used
mutated Lhca1 and Lhca4 apoproteins for in vitro
reconstitu-tions By this approach, we earlier identified tryptophan residues
at the N- and C-terminus of Lhca1 that are important for dimer
formation In order to analyze the involvement of the 2nd helix
of Lhca1 and Lhca4 in LHCI-730 assembly we produced chimers
of Lhca1 and Lhca4 that contained the 2nd helix of Lhca3,
which does not form dimers with Lhca1 or Lhca4 The Lhca4/
Lhca3 chimer did not form dimers with the Lhca1 wild type By
contrast, exchange of the 2nd helix in Lhca1 did not affect
dime-risation To identify the amino acids in the 2nd helix of Lhca4
that interact with Lhca1, point mutated Lhca4 proteins were
pro-duced Two groups of amino acids (86–88, 99–103) within helix 2
of Lhca4 were detected, that are involved in interaction with
Lhca1 Mutation of H99G resulted in a strongly reduced dimer
yield Additional mutation of three serine residues at the
begin-ning of the 2nd helix completely abolished dimerisation
Reintro-duction of those amino acids into the Lhca4/Lhca3 chimer, that
are present in the original Lhca4 sequence, resulted in recovery
of dimer formation capability This demonstrates that H99
together with serine residues at positions 86–88 is involved in
LHCI-730 assembly Additional mutants with impaired
dimerisa-tion will be presented and a model summarizing the current
knowledge of the subunit interaction in LHCI-730 will be shown
J1-009P
Mathematical modelling of electron transport
reactions in photosystem II
P Chernev1, I Zaharieva1, V Goltsev1and R J Strasser2
1Department of Biophysics and Radiobiology, Faculty of Biology,
University of Sofia, Sofia, Bulgaria,2Bioenergetics Laboratory,
Department of Plant Biology, University of Geneva, Geneva,
Switzerland E-mail: pchcher@yahoo.com
A mathematical model of electron transfer reactions in the
Phot-osystem II supramolecular complex is designed The model
includes the electron carriers between the oxygen-evolving
com-plex and the plastoquinone pool Specialized computer software
is developed that allows the automatic construction of the
differ-ential equations describing the transitions between the redox
states of the Photosystem II complex The model is tested using
the luminescent characteristics of Photosystem II – prompt and
delayed chlorophyll a fluorescence transients from dark to
light-adapted state By fitting the model curves to experimental ones
by the same software, the values of the rate constants of the
par-ticular electron transfer reactions are assessed An approach to
fitting is proposed that avoids over-parameterization and allows
the acquisition of correct values of the rate constants by the
sim-ultaneous fitting of several types of experimental curves (prompt
and delayed chlorophyll a fluorescence) and curves obtained at
different experimental conditions The method allows the
evalua-tion of the rate constants in native plants and in plants under the
influence of different environmental factors in in vivo and in situ measurements For example, as it is expected, the growing of bar-ley plants at different light intensities causes the change of the parameter that describes the Photosystem II antenna size
J1-010P New Insigths into the structure and function
of photosystem I and II
P Fromme, H Yu, Y Bukman, D Ni, B Varco-Merth,
D Chauhan, C Vanselow, C Jolley, R Fromme and
I Grotjohann Department of Chemistry and Biochemsitry, Arizona State University, Tempe, AZ, USA E-mail: pfromme@asu.edu Oxygenic photosynthesis converts the light energy from the sun into chemical energy The primary step in this energy conversion, the light induced charge separation, is catalyzed by Photosystem
I and II Photosystem I of cyanobacteria consists of 12 protein subunits, to which more than 100 cofactors are non-covalently bound The X-ray structure at 2.5 A˚ [1] showed the location of the individual subunits and cofactors and provided new informa-tion on the protein-cofactor interacinforma-tions The structural model of plant PS I was determined at 4.4 A˚ by Ben-Shem et al [2] Recent computations provided an atomic model of plant Photosystem I, shining light into the similarities and differences between both systems Photosystem II consists of 17 protein subunits to which about 50 cofactors are non-covalently bound The X-ray struc-tural model of the intact PS II complex at 3.8 A˚ resolution [3] thereby providing the first insight into the structure of the water splitting Photosystem II In the meantime, more structures from
PS II has been published at 3.7–3.2 A˚, revealing more details of the structures [4, 5, 6, 7] The different models and the many open questions which still remain will be discussed in respect to the functional aspects of the mechanism of water oxidation, elec-tron transfer and the process of light capturing
Acknowledgment: This work is supported by NIH (1 R01 GM71619-01), NSF MCB-0417142 and USDA (2003-35318-13573
References
1 Jordan et al Nature 2001; 411: 909
2 Ben-Shem et al Nature 2003; 426: 630
3 Zouni et al Nature 2001; 409: 739
4 Fromme et al Philos T Roy Soc B 2002; 357: 1337
5 Kamiya and Shen, Proc Natl Acad Sci U S A 2003; 100: 98
6 Ferreira et al Science 2004; 303: 1831
7 Biesiadka Phys Chem Chem Phys 2004; 6: 4733
J1-011P Kinetics of milliseconds delayed chlorophyll a fluorescence in whole leaves
V Goltsev1, I Zaharieva1, P Chernev1and R J Strasser2
1
Department of Biophysics and Radiobiology, Faculty of Biology ,
St Kliment Ohridski University of Sofia, Sofia, Bulgaria,2 Bioener-getics Laboratory, Department of Plant Biology, University of Geneva, Geneva, Switzerland E-mail: goltsev@biofac.uni-sofia.bg Delayed fluorescence dark decays in time interval from 0.35 to 5.5 ms are measured during dark to light adaptation in whole bar-ley leaves using a disc phosphoroscope The changes of delayed fluorescence features are compared with variable chlorophyll fluor-escence simultaneously registered with the same apparatus as well
as in parallel by Handy PEA (Hansatech Instruments Ltd.) and absorbance changes at 820 nm The registered delayed fluorescence signal is a sum of three components – sub-millisecond with life-time about 0.6 ms, millisecond decayed 2–4 ms and slow com-ponent with life-time >> 5.5 ms The sub-millisecond delayed
Trang 4fluorescence component is proposed to be a result of radiative
charge recombination in Photosystem II reaction centers in state
Z+PQA-QB-, and its lifetime is determined by the rate of electron
transfer from QA- to QB- The millisecond delayed fluorescence
component is associated with recombination in Z+PQA-QB=
cen-ters with a lifetime determined by the sum of the rate constants of
electron transfer from the oxygen-evolving complex to Z+and of
the exchange between the reduced and oxidized plastoquinone pool
in the QB
-site On the basis of these assumptions and of the
differ-ent share of the three compondiffer-ents in the integral delayed
fluores-cence during induction, an attempt is made to interpret the
changes in the delayed fluorescence intensity during the transition
of the photosynthetic apparatus from dark to light adapted state
J1-012P
Thermo-optically induced monomerization of
trimers of the main light harvesting antenna
complexes of plants in vivo and in vitro.
Quantum yield and dependencies on the
phosophorylation and zeaxanthin content of
the membranes
P H Lambrev, Z Va´rkonyi, T Ja´vorfi, A Kiss,
B.-A Namkhainyambuu, M Szabo´ and G Garab
Institute of Plant Biology, Biological Research Center, Szeged,
Hungary E-mail: lambrev@brc.hu
Earlier we have shown that the macro-organization and the
olig-omerization state of LHCII, the main chlorophyll a/b light
harvest-ing antenna complex of plants, possesses a remarkable and
unexpected structural flexibility: they are capable of undergoing
light-induced reversible structural reorganizations that are largely
independent of the photochemical activity of thylakoids The
reorganizations are approximately linearly proportional to the
light intensity above the saturation of photosynthesis – a
poten-tially very important, unique feature with respect to adaptation
and protection of plants against excess excitation This structural
flexibility is also carried by and probably ‘borrowed’ from LHCII,
and have been shown to be driven by a novel, biological
thermo-optic mechanism Fast thermal transients arising from dissipated
excitation energy can lead to elementary structural transitions
because of the existence of ‘‘built-in’’ thermal instabilities in the
close vicinity (<2 nm) of the sites of dissipation We have
identi-fied three well discernible thermo-optically induced structural
changes in LHCII-containing systems in vivo (in whole plants,
chloroplasts and sub-chloroplasts membrane preparations) and in
vitro(isolated trimers and lamellar aggregates of LHCII), including
monomerization of the trimers [1, 2, 3] In this work, we present
data on the quantum yield of this last step and its dependences on
the phosphorylation and zeaxanthin content of the membranes
Acknowledgment: This work was supported by EU-FP6
MCRTN INTRO2
References
1 Cseh et al Biochemistry 2000; 39: 15250
2 Garab et al Biochemistry 2002; 41: 15121
3 Dobrikova et al Biochemistry 2003; 42: 11272
J1-013P
Damage and protection of photosystem II
pigment-protein complexes under heat stress
N L Pshybytko, L N Kalituho and L F Kabashnikova
Institute of Biophysics and Cellular Engineering, National
Academy of Sciences of Belarus, Minsk, Belarus
E-mail: pshybytko@rambler.ru
The seedlings of different ages are characterized by various rates of
the photosynthetic reactions, therefore it is possible to suppose,
that they could possess different stability to the stress impact In this connection the effects of heat shock (40C, 3 h) on the photo-synthetic activity of 4, 7 and 11-day-old barley seedlings were stud-ied The rate of CO2gas exchange in young leaves was not changed under heat shock while in 11-day-old seedlings the high tempera-ture affected both quantum yield and maximum rate of CO2 fix-ation The thermostability of photosynthetic apparatus in young leaves can be caused by protective role of heat shock proteins (HSP) The appearance of 30 kDa HSP in young leaves and in less degree in old leaves was illustrated by means of Western blot ana-lysis This HSP is known to protect photosystem II (PSII).The pho-tochemical activity of PSII in both young and old barley leaves was decreased under high temperature However the causes of PSII thermoinactivation were different In 4-day-old leaves the effective quantum yield of PSII photochemistry was reduced while in old leaves high temperature decreased amount of active PSII com-plexes The causes of PSII disturbance in old leaves were the increase of the proton gradient on the thylakoid membrane and the increase of plastoquinone pool reduction The increase of plasto-quinone pool reduction was caused by the diminution of oxidizing ability of cytochrome b6/f complex The increased pH can induced the damage of electron transport chain and the degradation of pig-ment-protein complex of PS II The breaking of D1 and D2 protein was shown in 11-day-old leaves under high temperature Similar events were not obtained in young leaves, in which HSPs protect PSII from damage
J1-014P Structure and dynamics of the photosystem II reaction center pigment-protein complex
P Palencar1, F Vacha2,3and M Kuty1
1
Laboratory of High Performance Computing, Institute of Physical Biology and Institute of Landscape Ecology, University of South Bohemia in Ceske Budejovice, AS CR, Nove Hrady, Czech Repub-lic,2Institute of Plant Molecular Biology, Academy of Sciences of the Czech Republic, Ceske Budejovice, Czech Republic,3Institute
of Physical Biology, University of South Bohemia in Ceske Budejo-vice, Nove Hrady, Czech Republic E-mail: palencar@greentech.cz Photosystem II (PSII) is a light-absorbing pigment-protein com-plex located in thylakoid membrane of cyanobacteria, algae and higher plants Changes in excitonic interactions in PSII reaction center (RC) pigments upon light-induced oxidation of primary donor (P680) or reduction of primary acceptor pheophytin a (Phe a) were analyzed using absorption and circular dichroism (CD) spectra [1] In contrast to the oxidation of primary donor, the light-induced change in the CD spectrum upon primary acceptor reduction was temperature-dependent This suggests a hypothesis that at room temperature the reduced Phe a induces
conformation-al changes of the RC protein environment, which affects the exci-tonic interaction of the RC chlorophylls For better understanding and interpreting measured optical spectra [2], molecular dynamics (MD) coupled with ab initio calculations are appropriate methods
to be applied on PSII RC pigment-protein environment Having chemically well defined 3D molecular structure [3] and so-called force field (FF) parameters, conformational study of the PSII RC can be performed consequently by using MD technique Force field parameters (charge distribution and force constants) of the chlorophyll a, Phe a, heme, plastoquinone and surrounding amino acids of the PSII RC structure were calculated quantum chemic-ally and partichemic-ally transferred from various studies concerning bac-terial pigments [4, 5] and heme prosthetic group [6] Development
of all missing FF parameters of pigments from our truncated PSII
RC and calculation of charge distribution on reduced Phe a mole-cule and surrounding protein environment were necessary steps to run appropriate MD simulation and subsequently better under-stand processes in PSII RC
Trang 5Acknowledgment: This work was supported by MSMT
(AVOZ60870520)
References
1 Vacha F, Durchan M and Siffel P Biochim Biophys Acta
2002; 147: 1554
2 Vacha F, Psencik J, Kuty M, Durchan M, Siffel P Photosynth
Res2005; In press
3 Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S
Science2004; 303: 1831
4 Foloppe N, Ferrand M, Breton J, Smith JC Proteins 1995; 22:
226
5 Ceccarelli M, Procacci P, Marchi MJ Comput Chem 2003; 24:
129
6 Autenrieth F, Tajkhorshid E, Baudry J, Luthey-Schulten ZJ
Comput Chem 2004; 25: 1613
J1-015P
LH1 antenna complexes of Rhodospirillum
rubrum: a model for studying polypeptides
interactions in membrane
J Seguin1, G Ajlani1, J.-M Verbavatz1, R Gobin1, A Gall1,2,
M Paternostre1and B Robert1
1Service de Biophysique des Fonctions Membranaires, DBJC/CEA
- URA 2096/CNRS, Gif-sur-Yvette, France,2IBLS/Biochemisry
and Molecular Biology, University of Glasgow, Glasgow, UK
E-mail: jseguin@cea.fr
From the point of view of polypeptides association within
mem-brane, one of the best characterized membrane proteins is the
core antenna protein LH1 from the Rhodospirillum (Rsp.)
rubrum purple bacteria This protein ensures the capture of the
solar photons and the efficient funnelling of the resulting
excita-tion energy toward the photochemical reacexcita-tion center (RC) LH1
are large oligomers of a basic structural unit composed of a
het-erodimer of two small integral membrane polypeptide (alpha and
beta, ca 50 amino acids) associated with bacteriochlorophyll and
carotenoid molecules The electronic properties of LH1 intimately
depend on the association state of the polypeptides of which they
are composed In our study, the genes pufL and pufM in the
puf-BALM operon encoding the L and M subunits of the RC was
inactivated This mutant was only capable to growth under
aero-bic chemoheterotrophic conditions The electron microscopy of
the mutant compared to wild type show that this bacteria has a
tendency to die as soon as it reaches its growing stationary
phase The intracytoplasmic membranes purified from the mutant
and containing the LH1 complexes have been characterized
regarding their spectroscopic properties and systematically
com-pared to the spectra obtained on the intracytoplasmic membranes
extracted from the wild-type S1 strain of Rps rubrum This
char-acterization shows that the LH1 complexes formed in the
intracy-toplasmic membranes of the mutant are fully comparable to the
ones found in the wild type
J1-016P
Does backflow of electrons from the PQ-pool
contribute to the reduction of QA in
heat-treated leaves?
S Z Toth1, G Schansker1, G Garab2and R J Strasser1
1
Laboratory of Bioenergetics, Department of Plant Biology,
Uni-versity of Geneva, Geneva, Switzerland,2Institute of Plant Biology,
Biological Research Center of the Hungarian Academy of Sciences,
Szeged, Hungary E-mail: Toth1@etu.unige.ch
Photosynthetic electron transport processes, particularly within
photosystem II were studied in barley leaves during recovery
from a heat treatment In heat-treated leaves photosystem II (with a destroyed oxygen-evolving complex) can produce a sin-gle stable charge separation in continuous light leading to some
QA (the primary electron acceptor quinone of photosystem II) reduction and the emergence of the K-step in the chlorophyll a fluorescence rise (OKJIP) After the K-step (F~300 ls), addi-tional QA- accumulation occurs that is related to the heat-induced stimulation of dark reduction of the plastoquinone pool by a stroma factor [To´th et al J Plant Physiol, in press] Using chlorophyll a fluorescence and 820 nm transmission measurements the interaction between the plastoquinone pool and QA was further studied We try to answer the question if the additional QA- accumulation is possible because of slow re-reduction of TyrZ by external donors in the presence of a reduced plastoquinone pool (to study this, sequences of short light pulses (~300 ls) were used) or back flow from the plasto-quinone pool to QA
J1-017P New concept in photosynthesis: rapid reduction of carbon dioxide to formic acid and
to formaldehyde by glutathione and acetyl cystein via carbamate intermediate
L Tre´zl1, Z Ja´szay2, L Hulla´n3, T Szarvas4, I Petneha´zy1,
A Csiba5, L Sarkadi6and L To˜ke1
1Department of Organic Chemical Technology, Budapest Univer-sity of Technology and Economics, Budapest, Hungary,2Organic Chemical Technology Research Group, Hungarian Academy of Sci-ences, Budapest, Hungary,3Department of Biochemistry, National Oncological Institute, Budapest, Hungary,4Institute of Isotopes
Co Ltd., Budapest, Hungary,5Veterinary and Food Control Sta-tion, Budapest, Hungary,6Department of Biochemistry and Food Technology, Budapest University of Technology and Economics, Budapest, Hungary E-mail: trezl@oncol.hu
The generally accepted photosynthetic CO2 fixation path involves the carboxylation of ribulose 1,5-biphosphate (RuBP) Here we report a new chemical reaction, which is of general biochemical interest in plants, and may be an alternative of the Calvin cycle Our experimental data fully support the formation
of formic acid and formaldehyde from CO2 via carbamates in
a reduction process Though the presence of formic acid and formaldehyde (free and bound) was proved in plant leaves by
us and by others, too, the way of their formation and their role was not clear We monitored the formation of the carba-mate in a fast reaction of NaH13CO3with certain proteinogenic amino acids (l-lysine, l-arginine, l-glutamine and l-asparagine)
on physiological pH by 13C-NMR and HPLC measurements
We also detected that thiol group containing reducing factors (glutathione (GSH), N-acetyl cystein (NAC)) are able to reduce the carbamino group of the amino acids to formic acid and to formaldehyde (or to its equivalents) We also showed the increased amount of formic acid in the kohlrabi leaves extract treated its NaHCO3 solution by GSH and Arg+GSH.To get further evidence for the reduction of CO2 to formic acid via carbamates in the plant leaves we applied photosynthetic14CO2
fixation on bean leaves without treatment and pretreated with arginine The radio thin layer chromatography of the extract of the leaves showed the presence of arginine formiate in both cases, but higher amount in the case of the leaves pooled by arginine As we described earlier formaldehyde reacts with RuBP, providing its 2-hydroxymethyl adduct a substrate of the Rubisco enzyme, a key intermediate in photosynthesis
Trang 6Structural studies of a cryptophyte light
harvesting phycocyanin PC645
K E Wilk, S J Harrop, D Edler and P M Curmi
Protein Structure Laboratory, School of Physics, University of
NSW, Sydney, NSW Australia E-mail: k.wilk@unsw.edu.au
The photosynthesis process is essential for maintaining all forms
of life on the Earth Photosynthesis is made possible by the
cooperation of many different proteins in the process of turning
sunlight into useful chemical energy In marine systems, protein
pigments harvest solar energy photons and transfer excited state
energy to the reaction centre protein, where charge separation
takes place across a membrane In order to utilize energy
avail-able at different depths, marine photosynthesis relies on efficient
light harvesting in the visible region of the spectrum In addition
to commonly present chlorophylls cyanobacteria and algae have
pigments called phycobilins that are red or blue and absorb
energy in the corresponding visible region of light spectrum To
maintain efficiency and a high rate of electron transfer in the
reaction centre, the phycobilins are usually organized in antenna
The cryptophyte Chroomonas CCMP270 used in this project is a
unicellular photosynthetic alga The light harvesting system in
the cryptophytes is distinct from all other algae and
cyanobacte-rial A peripheral antenna consists of water-soluble protein,
phyc-ocyanin 645 (PC645) and a core antenna consists of protein
bound chlorophylls The chlorophylls absorb solar energy at 670
and 440 nm The fact that phycocyanin absorbs at 645 nm,
allows this algae to increase its efficiency and live at lower
light-regimes and greater depths than most other algae The pathways
for energy transfer between the light harvesting systems and the
reaction centre are still unknown So far, the only structure of a
cryptophyte light harvesting protein to be determined is that of
PE545, which was determined by our group [Wilk et al., 1999]
This protein has a novel arrangement of protein subunits and
tetrapyrrole pigments In the current project, I will study a
rela-ted cryptophyte light harvesting protein, PC645 This protein
harvests longer wavelength light than PE545 Its structure should
be similar to PE545 on a gross scale, but the full atomic structure
will reveal differences that are important to its distinct
absorb-ance characteristics
J1-019P Characterization of photosystem II by delayed chlorophyll a fluorescence
I S Zaharieva1, P C Chernev1, V N Goltsev1and
R J Strasser2
1
Department of Biophysics and Radiobiology, Biological Faculty, University of Sofia, ’St Kliment Ohridski’, Sofia, Bulgaria,
2
Laboratory of Bioenergetics, Department of Plant Biology, Section of Biology, University of Geneva, Geneva, Switzerland E-mail: iva@biofac.uni-sofia.bg
An approach to the investigation of structural and functional properties of Photosystem II based on the registration of delayed chlorophyll a fluorescence in native photosynthesizing objects is developed Using a disc phosphoroscope, we register simulta-neously (i) delayed fluorescence dark relaxation curves (decayed
in 0.35–5.5 ms time range) recorded every 11 ms during the transition of the photosynthetic apparatus from dark to light-adapted state and (ii) changes of the intensity of prompt chloro-phyll a fluorescence A mathematical model that includes the electron carriers between the oxygen-evolving complex and the plastoquinone pool is designed in order to analyze the lumines-cent characteristics of Photosystem II The registered delayed fluorescence signal is a sum of three components – sub-millisec-ond with life-time about 0.6 ms, millisecsub-millisec-ond decayed 2–4 ms and slow component with life-time >> 5.5 ms The sub-millisecond delayed fluorescence component is proposed to be a result of radiative charge recombination in Photosystem II reaction cen-ters in state Z+PQA-QB-, the millisecond one is associated with recombination in Z+PQA
-QB
=
centers and the slow one – with delayed light emission from closed reaction centers On the basis
of these assumptions and of the mathematical model, an attempt
is made to correlate the delayed fluorescence characteristics to particular processes occurring in the Photosystem II complex – proton or electrical gradient accumulation, changes in the redox state of quinone acceptors, changes in the pigment-protein com-plexes caused by different stress factors, for example tempera-ture
J2–Cell Cycle Control in Plants
J2–001
CULLIN-based ubiquitin ligases in plants:
phytohormones signalling but not much about
cell cycle yet
M.-C Criqui, M Dieterle, E Lechner, Y Parmentier,
T Potuschak, A Thomann and P Genschik
Laboratoire de Biologie Mole´culaire des Plantes, CNRS,
Strasbourg France E-mail: pascal.genschik@ibmp-ulp.u-strasbg.fr
The ubiquitin/26S proteasome pathway has dramatically changed
our understanding of cellular functions It is now clear that all
eukaryotic cells control a number of central processes by
break-ing down key regulatory proteins In particular, cell cycle
pro-gression and many developmental processes are tightly controlled
by ubiquitin-dependent protein degradation Ubiquitylation is
achieved through an enzymatic cascade involving the sequential
action of ubiquitin-activating (E1), ubiquitin-conjugating (E2)
and ubiquitin-ligating (E3) enzymes Among these enzymes, the
E3s play a central role in the selectivity of ubiquitin-mediated
protein degradation CULLIN (CUL)-dependent ubiquitin ligases
are structurally related multisubunit E3 enzymes that can be viewed as two functional modules brought together by the CUL-LIN proteins, acting as molecular scaffolds The first module forms the catalytic centre and is composed by a RING finger domain protein and an E2 enzyme The second module can be considered as the substrate recognition module, in which a
speci-fic protein physically interacts with the target substrate Members
of the CULLIN proteins have been identified in all eukaryotes and based on phylogenetic studies fall into different subfamilies, each forming a different class of E3 Among them, the best-char-acterized complexes are the SCF (SKP1-CUL1-F-box), the ECS (ElonginC-CUL2-SOCS box), the CUL3-BTB complexes, as well
as the APC/C (Anaphase Promoting Complex or Cyclosome), which contains a more distant CULLIN member, called APC2 The SCF and the APC/C play critical roles in the control of the cell cycle in fungi and metazoans, by promoting the entry into S-phase and mitotic progression and exit, respectively The pres-entation will cover our current knowledge on the function of the plant CULLIN-based E3s in cell cycle control and phytohor-mone regulation
Trang 7Integration of cell cycle and epigenetic
regulation during Arabidopsis development
W Gruissem
Institute of Plant Sciences, Swiss Federal Institute of Technology,
Zu¨rich, Switzerland E-mail: wilhelm.gruissem@ipw.biol.ethz.ch
Animals and plants have evolved complex regulatory mechanisms
that direct development and cell differentiation, but the
integra-tion of these processes with the cell cycle and chromatin
remodel-ling are not well understood Current models suggest that
mammalian Rb, and perhaps the plant homolog RBR1, has a
dual role in regulating cell cycle progression and cell
differenti-ation Rb family proteins are co-repressors of the E2F/DP family
of transcription factors, and together they control various aspects
of cell cycle progression Rb also functions to maintain the
differ-entiation status of several cell types and to protect cells from
apoptosis, perhaps via chromatin remodelling complexes For
example, mammalian Rb and plant RBR interact with RbAp48/
MSI1, a WD40 protein found in several complexes that function
in chromatin-related processes Complete loss of Arabidopsis
RBR1 or MSI1 function is gametophytically lethal Nuclei in the
region of the female egg apparatus continue to proliferate after
megagametogenesis, indicating that RBR1 is required to arrest
the nuclei of the egg apparatus prior to fertilization The
endo-sperm nucleus also proliferates in RBR1 or MSI1
loss-of-func-tion mutants, thus establishing a funcloss-of-func-tional link between these
two proteins MSI1 interacts with RBR1 and FIE, which is part
of a complex with MEA, a protein similar to the Drosophila
Polycomb group (PcG) protein E(Z) But in contrast to RBR1,
the egg apparatus does not overproliferate in MSI1 or other
fer-tilization independent seed (fis) mutants, suggesting that nuclear
proliferation is controlled by different mechanisms in the egg
apparatus and endosperm MSI1 is also a subunit of the CAF-1
chromatin assembly factor complex Although CAF-1 is well
defined in vitro, the precise function of the complex in vivo is still
poorly understood Loss of Arabidopsis CAF-1 function results
in developmental alterations Partial loss of MSI1 function results
in ectopic expression of genes for histone H3.3 variants (among
others), suggesting that MSI1 may have an important
develop-mental function in controlling the deposition of H3.3 variants
and gene activation
J2–003
The control of endoreduplication in
Arabidopsis
L De Veylder and D Inze
Plant Systems Biology, VIB/UGent, Ghent, Belgium
E-mail: dirk.inze@psb.ugent.be
Although our knowledge on how the different cell cycle
transi-tions are regulated has increased dramatically during the last
years [De Veylder et al., 2003; Inze´, 2005), it is still unclear how
a dividing cell exits its division programme and enters the
differ-entiation pathway A major cause explaining the lack of
informa-tion on this important aspect of development is the unavailability
of good differentiation markers Using the Arabidopsis leaf as a
model system we found that the exit of the mitotic cell cycle of
leaf cells coincides with the onset of endoreduplication, being a
modified cell cycle during which DNA is duplicated in the
absence of mitosis [Boudolf et al., 2004; Vlieghe et al., 2005] As
such, understanding how the mitosis-to-endocycle transition is
regulated might help to unravel how cell differentiation is
initiated Analysis of leaf development in transgenic plants
mis-expressing cell cycle genes illustrated that the onset of
endo-reduplication involves nothing more than loss of M-phase cyclin-dependent kinase (CDK) activity This decrease in activity was found to be controlled by the interplay of both positive and neg-ative regulators of CDKs Control mechanisms include the E2F/
DP pathway, activated protein destruction, and post-transcrip-tional activation of CDK inhibitory proteins A mathematical simulation of this complex regulatory circuit will be presented References:
1 Boudolf et al., 2004; Plant Cell 16:2683–2692
2 De Veylder et al., 2003; Curr Opin Plant Biol 6:536–543
3 Inze´, 2005; EMBO J 24: 657–662
4 Vlieghe et al., 2005; Curr Biol 15: 59–63
J2–004 Cytokinesis in Arabidopsis: rush-hour traffic during cell division
G Ju¨rgens ZMBP Entwicklungsgenetik, Universita¨t Tu¨bingen, Tu¨bingen, Germany E-mail: gerd.juergens@zmbp.uni-tuebingen.de Cytokinesis partitions the cytoplasm of a dividing cell between the forming daughter nuclei In higher plant cytokinesis, a new stretch of plasma membrane is laid down from the centre to the periphery of the cell Initially, a plant-specific cytoskeletal array, the phragmoplast, forms in the centre of the division plane and mediates trafficking of Golgi-derived vesicles which fuse with one another to form a transient membrane compartment, the cell plate Subsequently, the microtubules of the phragmoplast are depolymerised underneath the cell plate and new microtubules polymerise along the remaining ones at the margin, thus trans-forming the compact phragmoplast into a hollow cylinder As a result, new membrane vesicles are trafficked to, and fuse with, the margin of the cell plate Expansion of the cell plate proceeds
in concert with lateral translocation of phragmoplast microtu-bules until the expanding cell plate fuses with the lateral plasma membrane of the dividing cell We are using the Arabidopsis embryo as an assay system for identifying genes involved in cell division Two classes of mutants have been obtained Cytokinesis mutants are defective in cell-plate formation whereas cell-division mutants stop dividing altogether at a very early stage of embryo-genesis The genes identified encode components of the
cytokinet-ic vescytokinet-icle fusion machinery or proteins required for mcytokinet-icrotubule formation or reorganization Our current studies address membrane dynamics and specificity of vesicle fusion during cyto-kinesis
J2–005 The role of CDC20 isoforms in A thaliana cell cycle regulation and development
A Kroll, Z Kevei, Z Kelemen, E Kondorosi and A Kondorosi Laboratory of Adam Kondorosi, Institut des Sciences du Ve´ge´tal (ISV), Centre National de la Recherche Scientifique CNRS UPR2355, Gif-sur-Yvette, France E-mail: a_kroll@web.de
In animal systems, CDC20 has been shown to be of crucial importance for the cell cycle during mitosis by activating the Anaphase Promoting Complex (APC) E3 ubiquitin ligase The APC by interacting with the activator subunits, Cdc20 and Cdh1 controls ordered destruction of various cell cycle proteins – including mitotic cyclins – through the 26S proteasome The APC substrates contain characteristic destruction motives such the D-, KEN, A- and GxEN boxes Their recognition is medi-ated by the CDC20 and CDH1 proteins CDC20 expression as well as protein activity are subject to cell cycle dependent
Trang 8regu-lation mediated by transcription factors (Mcm1, SFF),
phos-phorylation (Bub1, MAPK), and protein–protein interaction
(Mad2) Unlike animals and yeast, CDC20 is represented by
five isoforms in Arabidopsis thaliana whose function has not
been explored yet Although the protein structure is highly
con-served among the plant and animal CDC20 homologs, only two
of the five plant isoforms display a significantly higher similarity
to the animal CDC20 proteins and contain the conserved APC
binding motifs and the KEN box required for destruction of
CDC20 by the APC-CDH1 complex Whether all of the five
plant proteins are functional is not known To elucidate the
function of the multiple A thaliana CDC20 isoforms, we have
been investigating the expression pattern the csd20 genes in
transgenic A thaliana carrying the Atcdc20 promoter-reporter
gene fusions as well as the interaction of the AtCDC20 proteins
with the A thaliana APC components and potential targets
such as different types of mitotic cyclins These data as well as
the knowledge on the plant Cdh1-type APC activators Ccs52
proteins are expected to give an insight in the plant APC
functions
J2–006
Kinase activity of cyclin-dependent kinase
complexes in the cell cycle of chlorococcal
algae
J Hendrychova´, M Vı´tova´, M E`ı´zˇkova´ and V Zachleder
Laboratory of Cell Cycles and Biotechnology of Algae,
Depart-ment of Autotrophic Microorganisms, Institute of Microbiology,
Academy of Sciences, Tøeboo`, Czech Republic
E-mail: jahen@alga.cz
Cyclin-dependent kinases (CDK) are enzymes, which require
binding to a cyclin subunit for their phosphorylation activity
CDK function is involved in proper timing of cell cycle processes,
e.g mitosis In contrast to the single CDK (Cdc2) in yeast, six
classes of CDKs referred to as CDKA-F have been reported for
higher plants Genes coding for CDKA-E were found in the
gen-ome of unicellular alga Chlamydomonas reinhardtii whose
CDKA was the first proven plant homologue of the key cell cycle
regulator Cdc2 We demonstrated CDK-like kinase activities in
protein extracts of the green alga Scenedesmus quadricauda
[Bisˇova´ et al., 2000] Recently we have focused attention on
sep-arated CDK complexes We found out that the CDKA occurs at
least in three different complexes in cells of Scenedesmus
quadric-auda, but only one of them contains a cyclin subunit and has a
kinase activity The protein related to Rb was detected in this
complex as its putative substrate The amount of this CDKA
complex increases during growth phase and its maximum
corre-lates with mitotic kinase activity In an attempt to analyse kinase
activity of CDK complexes, we modified a method of in-gel
kin-ase assay Besides the active CDKA complex we have detected
two more complexes with the CDK-like kinase activity However
none of them show the PSTAIR epitope characteristic for
CDKA We deduce that these non-PSTAIR complexes could be
responsible for CKS (suc1)-bound kinase activity Function of
different types of CDKs and their complexes in cell cycle
regula-tion of algae is discussed
Acknowledgment: This work was supported by grants from the
GAASCR (KJB5020305) and the GACR (204/02/1438)
Reference:
1 Bisˇova´ K, Vı´tova´ M, Zachleder V 2000 The activity of total
histone H1 kinases is related to growth and commitment
points while the p13(suc1)-bound kinase activity relates to
mitoses in the alga Scenedesmus quadricauda Plant Physiology
and Biochemistry 38: 755–764
J2–007P Big family for successful living: NCR oligopeptides for coordinated cell differentiation in legume-Rhizobium symbiosis
B Alunni1, P Mergaert1, N Maunoury1, M Redondo-Nieto1, A.-E Mausset1, T Uchiumi2, A Kondorosi1and E Kondorosi1
1
Groupe Interactions Rhizobium-Le´gumineuses, Institut des Sciences du Ve´ge´tal, CNRS UPR2355, Gif-sur-Yvette, France,
2
Laboratory of Molecular Biology of Plant-Microbe Interactions, Department of Chemistry and BioScience, Faculty of Science, Kagoshima University, Kagoshima, Japan
E-mail: Benoit.Alunni@isv.cnrs-gif.fr The symbiotic interaction between Medicago truncatula and Sino-rhizobium melilotisoil bacteria leads to the formation of nitrogen fixing root nodules In the infected nodule cells, rhizobia are con-verted into nitrogen fixing bacteroids Differentiation of the pro and eukaryotic symbiotic cells is strikingly similar, manifested by cell division arrest, cell enlargement and genome amplification This suggests coordinated development and signalling events between the plant cells and rhizobia These signals are expected
to be nodule specific and present at distinct stages of develop-ment A recently identified gene family composed of more than
300 members corresponds to these criteria They encode Nodule-specific Cystein-Rich (NCR) polypeptides [Mergaert et al., 2003] with resemblance to antimicrobial defensins and scorpion toxins The NCRs are composed of a highly conserved signal peptide (SP) and a variable mature oligopeptide of 25–55 amino-acids containing four or six conserved cystein residues Nodule tran-scriptomics groups NCRs in five large clusters All tested NCRs from the distinct groups expressed exclusively in the infected cells and in distinct cell layers or nodule zones The NCRs are likely targeted to the bacteria Thus, expression pattern, localization and high diversity of NCRs support their role in communication between the eukaryotic and prokaryotic cells at distinct stages of development In addition, co-expression of a nodule specific sig-nal peptide peptidase (SPP) with a certain group of NCRs sug-gests that further cleavage of NCR SPs by SPP may release peptide fragments with potential signalling role, as in animals [Weihofen et al., 2002]
References:
1 Weihofen et al 2002; Science 296: 2215–8
2 Mergaert et al 2003; Plant Physiol 132: 161–173
J2–008P Purification of cAMP-binding proteins from tobacco BY-2; cloning, expression and characterization of a cAMP-binding nucleoside diphosphate kinase 1
T De Vijlder, L Roef, H Van Onckelen and K Laukens Laboratory of Plant Biochemistry and Physiology, Department of Biology, University of Antwerp, Antwerp, Belgium
E-mail: thomas.devijlder@ua.ac.be Cyclic AMP plays an important role in the regulation of the euk-aryotic cell cycle In tobacco ‘‘Bright Yellow 2’’ (BY-2), cAMP levels show stage-dependent oscillations Inhibition of cAMP-syn-thesis results in a block in cell cycle progression [Ehsan et al 1998] Previous work in our laboratory using affinity chromatog-raphy led to the purification of three cAMP-binding proteins from tobacco BY-2, which were identified as glyceraldehyde 3-phosphate dehydrogenase (GAPDH) and two nucleoside diphosphate kinase isoforms (NDPK1 and NDPK3) [Laukens
et al 2001] Besides their noted enzymatic activities, these
Trang 9proteins are known to perform a number of alternative actions in
a variety of organisms NDPK isoforms in particular, play roles
in phytochrome and oxidative stress signal transduction Some
NDPK isoforms are also capable of phosphorylating protein
sub-strates (including themselves) and interact with a number of
regu-latory proteins To enable detailed characterization of the,
presumably cytosolic, tobacco NDPK1, the cDNA was cloned
using a PCR strategy The coding sequence was introduced into
the Gateway system (Invitrogen) and expressed NDPK1 was
purified from E coli lysate using a cleavable His-tag The
charac-terization of the BY-2 NDPK1 gene product will focus on the
characterization of its potential functions, its interactions with
other proteins and the effect of cAMP The status of the ongoing
NDPK1 characterization will be presented Besides GAPDH and
the NDPK isoforms, a number of other proteins were shown to
interact with immobilized cAMP, albeit in much lower
abun-dance Their identities and potential functions will also be
dis-cussed
References:
1 Ehsan et al 1998; FEBS Lett 422: 165–169
2 Laukens et al 2001; FEBS Lett 508: 75–79
J2–009P
Affinity chromatography isolation and
characterization of soluble cGMP-binding
proteins fromavenaL satival seedings
L V Dubovskaya and I D Volotovski
Laboratory of Molecular Biology of Cell, Institute of
Biophysics and Cell Engineering, National Academy of
Sciences of Belarus, Minsk, Belarus
E-mail: lpcp@biobel.bas-net.by; dubovsk@mail.ru
Guanosine 3¢,5¢-cyclic monophosphate (cGMP) was shown to
play a crucial role in light, phytohormone and nitric oxide
sig-nal transduction in plants Rhythmic oscillation of its
concen-tration and stimulation of floral induction by cGMP was
detected in higher plants The specificity of cellular responses to
cGMP is based on cGMP-binding activities of target proteins
Until now the elucidation of cGMP-binding activity and
identi-fication of cGMP targets in a plant cell are at the initial stage
of investigation We report the attempt to reveal the targets for
cGMP action in Avena sativa L seedlings using the affinity
purification and electrophoresis identification of cGMP-binding
proteins that were not previously demonstrated in higher plants
To elucidate the early molecular events associated with
biologi-cal action of cGMP its binding to the structural components of
Avena sativa L plant cell has been studied cGMP was shown
to be bound specifically to proteins located predominantly in
soluble cytosolic fraction The Scatchard plot analysis indicated
the presence in Avena sativa L cells of two classes of cyclic
GMP-specific binding sites with high and low affinity for
cGMP The heating and the treatment of samples with trypsin
and pronase suppressed the ability of the sites to bind to
cGMP Together with the dependence of the binding activity
on pH these results suggest the protein nature of
cGMP-bind-ing sites About ten specific cGMP-bindcGMP-bind-ing proteins were
detec-ted in cytosol with help of cGMP-agarose affinity purification
procedure followed by SDS-PAGE They showed an apparent
molecular weight of 15 and 18 kDa, about 30–40 kDa and 53,
58 and 72 kDa The possible nature of purified proteins was discussed
J2–010P Cyclin-dependent kinases of the green alga Chlamydomonas reinhardtii.
M E`ı´zˇkova´1, K Bisˇova´2, J Hendrychova´1, M Vı´tova´1and
V Zachleder1
1Laboratory of Cell Cycles and Biotechnology of Algae, Depart-ment of Autotrophic Microorganisms, Institute of Microbiology, Academy of Sciences, Tøeboo`, Czech Republic,2The Salk Institute
of Biological Sciences, La Jolla, CA 92037 USA
E-mail: majka.p@pobox.sk The biflagellate unicellular alga Chlamydomonas reinhardtii is used as a model system for cell cycle studies Its uniqueness is grounded mainly in cell division, which occurs by non-canonical mechanism termed multiple fission In spite of this, Chlamydo-monasis simply handling model thanks to its autotrophic unicell lifestyle and to possibility of culture synchronization Moreover, its genome has recently been sequenced Eukaryotic cell cycle is controlled by a set of conserved proteins This set includes the cyclin-dependent kinases (CDK), which have a key role in coordinating the cell division and in integrating diverse growth-regulatory signals In spite of the fact that kinases have been studied for many years, investigation of CDKs has not been completed yet, especially in photo-autotrophic organisms We decided to study the capability of CDKs from C reinhardtii to complement yeast cdc28 mutant and the intracellular localization
of these algal kinases in the course of the cell cycle We have inserted genes coding algal CDKA and CDKB into pENTR vec-tor The resulting entry clone (pENTR-CDK) was ready for recombination with any destination vector to create an expres-sion clone We employed the destination vector specialized in expression in yeast allowing us to perform a complementation test of a S cerevisiae cdc28 mutant Algal CDK was shown to complement cdc28 mutation in S cerevisiae We have constructed
a vector with the cgfp gene fused in frame to a Gateway cas-sette, which is under control of the rbcS2 promoter and termina-tor The gene encoding green fluorescent protein adapted to the codon usage of C reinhardtii (cgfp), was used from pMF124cGFP plasmid The Gateway cassette contains attR recombination sites flanking a ccdB gene and a Cmr gene We assume that this vector will serve as a useful tool to visualize syn-thesis of different cell cycle proteins and their localization in vivo
in the alga C reinhardtii
(KJB5020305) and from GACR (204/02/1438)
J2–011P Protein complexes through the plant cell cycle: their composition and dynamics
N Remmerie, L Roef, K Laukens, H Van Onckelen and
E Witters Plant physiology and biochemistry, CEPROMA, Biology Univer-sity Antwerp, Antwerp, Belgium E-mail: noor.remmerie@ua.ac.be
By means of a gel based proteome strategy using blue native gel electrophoresis, we investigated the dynamics of protein
Trang 10com-plexes during the Nicotiana tabacum cv Bright Yellow-2 (BY-2)
cell cycle by studying changes in their concentration and subunit
build up, and by looking at their post-translational modifications
Samples of synchronized cell suspensions were taken at different
phases throughout the cell cycle and subjected to non-denaturing
blue native polyacrylamide gelelectrophoresis (BN-PAGE) to
sep-arate protein complexes based on their size while preserving
the quaternary structure Samples were subsequently subjected
to a denaturing second dimension, SDS-PAGE, in which the
complexes break up into their constituents, or to a native pH
gradient separating protein complexes according to their pI
Visualization of 2DGE-separated proteins was done by
ruthen-ium-based fluorescent staining In order to follow the dynamics
of complexes during their progression through the plant cell
cycle, we investigated the possibilities of combining the BN
PAGE technique with 2D difference in gel electrophoresis
(2D-DIGE)(Amersham Biosciences) This gel based proteome display
can easily be further combined with specific staining methods like
Pro-Q diamond and Pro-Q Emerald (Invitrogen) to reveal
post-translational modifications such as phosphorylation and
glycosy-lation that are needed for complex formation or activity Proteins
revealing significant quantitative differences or post-translational
modifications were submitted to mass spectrometric
identifi-cation The identity, composition and differential regulation
of the complexes will be discussed in relation with cell cycle
physiology
J2–012P
Buchnania lanzan extract administration
increases the life span of rats with
hepatocellular carcinoma
D G Reddy, R Kartik, V C Rao, K M Unnikrihsnan and
P Pusphangadan
Laboratory of Ethnopharmacology, Department of Pharmacology,
NBRI, Lucknow, UttarPradesh India
E-mail: dayanandr@yahoo.com
The effect of Buchnania lanzan bark extract administration after
induction of hepatocellular carcinoma (H.C.C) by
N-nitrasodieth-ylamine (NDEA) was studied in wistar rats Administration of
ethanolic extract of B lanzan was found to significantly increase
the survival of H.C.C harbouring animals All untreated rats died
of tumor burden by 37.4 ± 1.9 weeks Administration of B
lan-zan extract (200 mg/kg b.w) after tumor development increased
the survival of animals to an average of 52 ± 2.5 weeks Serum
gama glutamyl transpeptidase activity which was elevated to
185 ± 20 u/l by NDEA administration was lowered to
110 ± 19 u/l by the administration of B lanzan extract Similarly
elevated glutathione S-transferase activity (1445 ± 113 nmol/
min/mg protein) and glutathione (24.3 ± 2.0 nmol/mg protein)
levels in the NDEA administered group were found to be lowered
to 1001 ± 80 nmol/min/protein and 12.5 ± 2.5 nmol/mgprotein
respectively B lanzan
J2–013P Effect of Diphenylmethyl selenocynate on N-nitrosodiethylamine-induced
hepatocarcinogenesis in rats.
C V Rao, S K Ojha, A K S Rawat, D G Reddy, R Kartik and P Pushpangadan
Laboratory of Ethnopharmacology, Department of Pharmacognosy and Ethnopharmacology, N B R I, Lucknow, Uttar Pradesh, India E-mail: chvrao72@yahoo.com
Aim: Effect of Diphenylmethyl selenocynate on N-nitrosodiethyl-amine-induced hepatocarcinogenesis in rats
Methods: Rats were given a single intraperitoneal injection of N-nitrosodiethlyamine (200 mg/kg body wt) followed by subcuta-neous injection of carbon tetrachloride (3ml /kgbody wt/week) for 6 weeks.The animals were randomized and grouped into experimental and control rats (n = 6 in each group) Group I (control) rats were treated with 0.9% normal saline through out the study Group II rats received single injection of N-nitro-sodiethlyamine (200 mg/kg body wt) followed by subcutaneous injection of carbon tetrachloride (3ml /kgbody wt/week) for
6 weeks Group III rats were injected with N-nitrosodiethlyamine
as in group II and treated with Se compound (2 mg/kg body wt
in 5.5% propylene glycol p.o) daily Group IV rats were treated with Se compound (2 mg/kg body wt in 5.5%propylene glycol p.o) The experiment was terminated after 20 weeks and all ani-mals were killed by cervical dislocation after an overnight fast Blood was collected and serum was separated Liver tissues were taken in ice-cold container for biochemical determinations Results: The serum glutamate oxaloacetate transaminase (SGOT) and serum glutamate pyruvate transaminase (SGPT) which is the liver injury marker enzyme was significantly (P < 0.01)elevated in NDEA treated group and was significantly (P < 0,01) reduced after treatment with Se compound in group III (47% decrease in SGOT and 53% decrease in SGPT level when compared to NDEA treated group) The Alkaline phospha-tase (ALP) which was reduced in Group III compared with NDEA group (49% reduction in the level of ALP) The tumour marker enzyme, gamma glutamyl transpeptidase(GGT) was sig-nificantly higher in NDEA group both in serum and liver was drastically (P < 0.001) reduced upon treatment with Se com-pound in group III (36% decrease in GGT level both in serum and liver) The Gluthathione S-transferase(GST) is an detoxifying enzyme in conjugation with reduced gluthathione (GSH) was ele-vated in wide variety of tumour, the decrease in the level (81% decrease in GST and 51% reduction in GSH) which showed its affinity to detoxifying and protect the liver against NDEA induced hepatocarcinogenesis 5¢-nucleotidase activity was observed higher in liver cancer, the Se compound potentiate the decrease in the level of 5¢-nucleotidase (44% reduction in the level when compared to NDEA treated group)
Conclusion: In the present study, the hepatocarcinogenic inhibi-tory effect of diphenylmethyl selenocynate as evident from the result against various aspects of NDEA-induced hepatocarcino-genesis is due to the upregulation of phase II detoxifying enzymes and inhibition of lipid peroxidation