PROGRAM OF THE FIFTH INTERNATIONAL CONFERENCE ON BIOINFORMATICS OF GENOME REGULATION AND STRUCTURE

RUSSIAN ACADEMY OF SCIENCESSIBERIAN BRANCH INSTITUTE OF CYTOLOGY AND GENETICS PROGRAM OF THE FIFTH INTERNATIONAL CONFERENCE ON BIOINFORMATICS OF GENOME REGULATION AND STRUCTURE BGRS’200

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RUSSIAN ACADEMY OF SCIENCES

SIBERIAN BRANCH INSTITUTE OF CYTOLOGY AND GENETICS

PROGRAM

OF THE FIFTH INTERNATIONAL CONFERENCE

ON BIOINFORMATICS

OF GENOME REGULATION

AND STRUCTURE

BGRS’2006 Novosibirsk, Russia July 16–22, 2006

Novosibirsk 2006

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INTERNATIONAL PROGRAM COMMITTEE

Nikolay Kolchanov Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia

(Chairman of the Conference)

Ralf Hofestaedt University of Bielefeld, Germany

(Co-Chairman of the Conference)

Dagmara Furman Institute of Cytology and Genetics SB RAS, Novosibirsk,

(Conference Scientific Secretary)

Dmitry Afonnikov Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia Mikhail Gelfand GosNIIGenetika, Moscow, Russia

Vadim Govorun Institute of Physicochemical Medicine, RAMS, Moscow, Russia Reinhart Heinrich Humboldt University Berlin, Berlin, Germany

Charlie Hodgman Multidisciplinary Centre for Integrative Biology,

School of Biosciences, University of Nottingham, UK

Alexey Kochetov Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia Eugene Koonin National Center for Biotechnology Information,

National Library of Medicine, National Institutes of Health, Bethesda, USA

Vassily Lyubetsky Institute for Informational Transmission Problems RAS,

Moscow, Russia

Luciano Milanesi National Research Council – Institute of Biomedical Technology, Italy Viatcheslav Mordvinov Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia Yuriy Orlov Genome Institute of Singapore, Singapore

Igor Rogozin Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia

Cenk Sahinalp Computing Science, Simon Fraser University, Burnaby, Canada Maria Samsonova St.Petersburg State Polytechnic University, St.Petersburg, Russia Akinori Sarai Kyushu Institute of Technology (KIT), Iizuka, Japan

Konstantin Skryabin Centre "Bioengineering" RAS, Moscow, Russia

Rustem Tchuraev Institute of Biology, Ufa Sci Centre RAS, Ufa, Russia

Denis Thieffry ESIL-GBMA, Universite de la Mediterranee, Marseille, France

Jennifer Trelewicz IBM Almaden Research Center, San Jose, California, USA

Edgar Wingender UKG, University of Goettingen, Goettingen, Germany

Lev Zhivotovsky Institute of General Genetics RAS, Moscow, Russia

Jagath C Rajapakse School of Computer Engineering,

Nanyang Technological University, Singapore

LOCAL ORGANIZING COMMITTEE

Sergey Lavryushev Institute of Cytology and Genetics, SB RAS, Novosibirsk

(Chairperson)

Ekaterina Denisova Institute of Cytology and Genetics, SB RAS, Novosibirsk

Andrey Kharkevich Institute of Cytology and Genetics, SB RAS, Novosibirsk

Galina Kiseleva Institute of Cytology and Genetics, SB RAS, Novosibirsk

Anna Onchukova Institute of Cytology and Genetics, SB RAS, Novosibirsk

Natalia Sournina Institute of Cytology and Genetics, SB RAS, Novosibirsk

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Our sponsors

Organizers

Laboratory of Theoretical Genetics

of the Institute of Cytology and Genetics, SB RAS

Institute of Cytology and Genetics, SB RAS

Siberian Branch of the Russian Academy

of Sciences

В А В И Л О В С К О Е О Б Щ Е С Т В О

Г Е Н Е Т И К О В И С Е Л Е К Ц И О Н Е Р О В Vavilov Society of Geneticists and Breeders

Scientific Council on Bioinformatics,

Siberian Branch of the Russian Academy

of Sciences

Chair of Informational Biology,

Department of Natural Sciences,

Novosibirsk State University

Grants

INTAS Grant

Russian Foundation for Basic Research

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THE FIFTH INTERNATIONAL CONFERENCE

ON BIOINFORMATICS OF GENOME REGULATION

AND STRUCTURE (BGRS'2006)

CONFERENCE PROGRAMSCHEDULE AT A GLANCE

The Conference Sessions will be held in the Small Conference Hall and in Music Salon

(room no 220) of the House of Scientists

July 16, Sunday Foyer of the Small Conference Hall

10:00-14:00 Registration of the conference participants*

*Participants who come later are welcome for registration in the Organizing Committee room (House of Scientists, room no.200) on any conference day

12:30-14:00 Lunch

Small Conference Hall

14:00 Conference Opens:

Welcome by

Academician of the Russian Academy of Sciences Vladimir Shumny,

Director of the Institute of Cytology and Genetics, Siberian Branch

of the Russian Academy of Sciences

Greetings of

Corresponding member of the Russian Academy of Sciences, Professor

Nikolay Kolchanov and Professor Ralf Hofestaedt

Computer demos of this session will be available during the entire conference day

July 18, Tuesday Small Conference Hall

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14:30 -17:25 Evening Session

COMPUTATIONAL STRUCTURAL AND FUNCTIONAL PROTEOMICS

16:05-16:35 Coffee break

July 19, Wednesday Foyer of the Small Conference Hall

July 20, Thursday Music Salon (room no.220)

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July 22, Saturday Small Conference Hall

16:40-17:20 Closing Ceremony; Comments of Session Chairpersons

of the Russian Academy of Sciences, Novosibirsk, Russia

1 Mazo I *, Sivachenko A., Yuryev A., Daraselia N.

Ariadne Genomics, Inc., Rockville, USA

MOLECULAR NETWORKS IN MAMMALS: EXTRACTION

FROM LITERATURE AND MICROARRAY

15:15

14:30-2. Rodin S.N.1* , Rodin A.S 2

1 Beckman Research Institute of the City of Hope, Duarte, CA, USA

2 Human Genetics Center, School of Public Health, University of Texas, Houston, TX, USA

GENE DUPLICATIONS IN EVOLUTION: FROM ORIGIN

OF THE GENETIC CODE TO THE HUMAN GENOME

16:00

15:15-Coffee/tea break 16:00-16:30

3 Ivanov A.S.*, Gnedenko O.V., Molnar A.A., Mezentsev Yu.V., Lisitsa A.V.,

Archakov A.I

V.N.Orechovich Institute of Biomedical Chemistry RAMS, Moscow, Russia

PROTEIN-PROTEIN INTERACTIONS AS NEW TARGETS FOR DRUG

DESIGN: INTERACTIVE LINKS BETWEEN VIRTUAL

AND EXPERIMENTAL APPROACHES

17:15

16:30-4 Samsonova M.G.1, Reinitz J.2

1St Petersburg State Polytechnical University, St Petersburg, Russia

2 Stony Brook University, Stony Brook, New York, USA

SYSTEMS BIOLOGY OF SEGMENT DETERMINATION

18:00

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17:15-ORAL PRESENTATIONS

Dear speakers, please, plan your presentation time including 5 minutes for questions

Only PowerPoint presentations made in Microsoft Office 2003 or earlier versions can

be accepted Use embedded pictures and animations only; picture and animation links

to the Internet or to other files will not be accessible

Slide projectors or overhead projectors are NOT available during the BGRS'2006 Conference

Please, take into account that it will not be possible for you to load your presentation during the session by yourselves Presentations are loaded on the main computer by the technician of the Organizing Committee only.

To ensure that the presentations are well prepared and compatible with the main presentation computer, we strongly advice you to bring your materials as PowerPoint files on USB device or CD disk to the Room no 200 at the House of Scientists and

check the presentation with the technician of the Organizing Committee not later than 30 min before the start time of the session where you are presenting This will

prevent any confusion when loading the presentations on the main computer.

You may also bring your laptop for copying your presentation to the main presentation computer Use of your own laptop during your presentation is not recommended

If you have any questions, please do not hesitate to contact the Organizing Committee in Room no 200 at the House of Scientists.

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July 17, Monday House of Scientists, Small Conference Hall

Morning Session 9:30-12:45

COMPUTATIONAL STRUCTURAL AND FUNCTIONAL GENOMICS

AND TRANSCRIPTOMICS

Co-chairpersons:

Prof Andrey Mironov, Department of Bioengineering and Bioinformatics, Moscow

State University, Moscow, Russia

Dr Georgii Bazykin, Department of Ecology and Evolutionary Biology, Princeton

University, Princeton, NJ, USA

1 Seliverstov A.V.*, Lyubetsky V.A.

Institute for Information Transmission Problems RAS, Moscow, Russia

GENE EXPRESSION REGULATION IN ACTINOBACTERIA

AND CHLOROPLASTS

9:55

9:30-2 Grosse I. 1,2

1Leibniz Institute of Plant Genetics and Crop Plant Research (IPK)

2Bioinformatics Center Gatersleben-Halle, Gatersleben, Germany

COMPUTATIONAL IDENTIFICATION OF TRANSCRIPTION FACTOR

BINDING SITES WITH VARIABLE ORDER BAYESIAN NETWORKS

10:20

9:55-3 Levitsky V.G 1,2*, Ignatieva E.V.1,2, Ananko E.A.1, Merkulova T.I.1

1Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia

2Novosibirsk State University, Novosibirsk, Russia

THE SITEGA AND PWM METHODS APPLICATION

FOR TRANSCRIPTION FACTOR BINDING SITES RECOGNITION

IN EPD PROMOTERS

10:40

10:20-Coffee/tea break 10:40-11:10

4 Shelest E.S.*1, Wingender E.1,2

1Department of Bioinformatics, UKG, University of Göttingen, Göttingen,

Germany

2BIOBASE GmbH, Wolfenbüttel, Germany

PROMOTER MODELING APPROACHES APPLIED TO THE

INVESTIGATION OF p63 UP- AND DOWNSTREAM PROMOTERS

11:35

11:10-5 Vorobjev Y.N., Emelianov D.Y.

Institute of Chemical Biology and Fundamental Medicine, SB RAS,

Novosibirsk, Russia

MODELING OF DATA BASE OF CONTEXT-DEPENDENT CONFORMATIONAL

PARAMETERS OF DNA DUPLEXES

11:35-12:00

6 Kamzolova S.G., Osypov A.A.*, Dzhelyadin T.R., Beskaravainy P.M., Sorokin

A.A

Institute of Cell Biophysics of RAS, Pushchino, Moscow region, Russia

CONTEXT-DEPENDENT EFFECTS OF UPSTREAM A-TRACTS

ON PROMOTER ELECTROSTATIC PROPERTIES AND FUNCTION

12:20

12:00-7 Vishnevsky O.V.1,2*, Konstantinov Yu.M.3

3Siberian Institute of Plant Physiology and Biochemistry SB RAS, Irkutsk, Russia

ANALYSIS OF THE NUCLEOTIDE CONTEXT OF HIGHER PLANT

MITOCHONDRIAL mRNA EDITING SITES

12:45

12:20-12:45-14:30 Lunch break

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July 17, Monday House of Scientists, Small Conference Hall

Evening Session 14:30-18:10

COMPUTATIONAL STRUCTURAL AND FUNCTIONAL GENOMICS

AND TRANSCRIPTOMICS

Co-chairpersons:

Prof Vasily Lyubetsky, Institute for Information Transmission Problems,

the Russian Academy of Sciences, Moscow, Russia

Dr Ivo Grosse, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK)

and Bioinformatics Center Gatersleben-Halle, Gatersleben, Germany

1. Omelianchuk N.A.1, Khomicheva I.V.1, Savinskaya S.A. 1,2, Levitsky V.G.1,2,

Vishnevsky O.V. 1,2, Katokhin A.V.1,2, Ponomarenko M.P.1 , Kolchanov N.A.1,2

2 Novosibirsk State University, Novosibirsk Russia

REVEALING THE FUNCTIONAL-SPECIFIC TEXTUAL FEATURES

OF THE microRNA SEQUENCES IN ARABIDOPSIS THALIANA

14:55

14:30-2. Tutukina M.N., Masulis I.S., Ozoline O.N.*

Institute of Cell Biophysics RAS, Pushchino, Moscow region, Russia

TOWARDS THE IDENTIFICATION OF ANTISENSE RNA

WITHIN GENES OF TRANSCRIPTION REGULATORS

14:55-15:15

3 Orlov Yu.L.1, Zhou J.1, Lipovich L.1, Yong H.C.2, Li Yi2, Shahab A.2,

Kuznetsov V.A.1*

1Genome Institute of Singapore, Singapore

2Bioinformatics Institute, Singapore

A COMPREHENSIVE QUALITY ASSESSMENT OF THE AFFYMETRIX

U133A/B PROBESETS BY AN INTEGRATED GENOMIC

AND CLINICAL APPROACH

15:35

15:15-4 Kuznetsov V.A.*, Zhou J., George J., Orlov Yu.L

Genome Institute of Singapore, Singapore

GENOME-WIDE CO-EXPRESSION PATTERNS OF HUMAN

CIS-ANTISENSE GENE PAIRS

16:00

15:35-Coffee/tea break 16:00-16:30

5 Efimov V.M. 1*, Badratinov M.S.2, Katokhin A.V.2,3

1Institute of Systematics and Ecology of Animals, SB RAS, Novosibirsk, Russia

2Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia

INTERPRETATION OF RESULTS OF SOM ANALYSIS

OF MICROARRAY DATA BY PRINCIPAL COMPONENTS

16:55

16:30-6. Subkhankulova T., Livesey F.J.

Gurdon Institute and Department of Biochemistry, University of Cambridge,

Tennis Court Road, Cambridge, CB2 1 QN, UK

HOW SIMILAR ARE PHENOTYPICALLY IDENTICAL CELLS

AT THE TRANSCRIPTIONAL LEVEL

16:55-17:20

7 Abhishek K 1*, Karnick H.1, Mitra P.2

1Indian Institute of Technology Kanpur, Kanpur, India

2Indian Institute of Technology Kharagpur, Kharagpur, India

A KNOWLEDGE AND DATA BASED HYBRID APPROACH

TO GENE CLUSTERING

17:45

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Co-chairpersons:

Dr Kaiser Jamil, Indo American Cancer Institute and Research Center,

Hyderabad, India

Dr Roman Efremov, M.M Shemyakin and U.A.Ovchinnikov Institute of Bioorganic

Chemistry, the Russian Academy of Sciences, Moscow, Russia

1 Vlasov P.K.*, Esipova N.G., Tumanyan V.G.

Engelhardt Institute of Molecular Biology, Russian Academy of Sciences,

Moscow, Russia

CONFORMATION PROPERTIES OF SHORT OLIGOPEPTIDES

AND PREDICTION OF PROTEIN CHAIN CONFORMATION

9:55

9:30-2 Volynsky P.E.*, Vereshaga Ya A., Nolde D.E., Efremov R.G

M.M.Shemyakin and Yu.A.Ovchinnikov Institute of Bioorganic Chemistry

RAS, Moscow, Russia

PROBING DIMERIZATION OF TRANSMEMBRANE PEPTIDES

VIA MOLECULAR DYNAMICS IN EXPLICIT BILAYERS

10:20

9:55-3 Chekmarev S.F.1*, Krivov S.V.2, Karplus M.2,3*

1 Institute of Thermophysics SB RAS, Novosibirsk, Russia

2 Laboratoire de Chimie Biophysique, ISIS, Université Louis Pasteur,

Strasbourg, France

3 Department of Chemistry and Chemical Biology, Harvard University,

Cambridge, MA, USA

“STRANGE KINETICS” OF UBIQUITIN FOLDING: INTERPRETATION

IN TERMS OF A SIMPLE KINETIC MODEL

10:45

10:20-Coffee/tea break 10:45-11:15

4 Afonnikov D.A.1,2

1 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia

2 Novosibirsk State University, Novosibirsk, Russia

RESIDUE-RESIDUE CONTACT MAP PREDICTION FOR PROTEINS

11:40

11:15-5 Aksianov E 1*, Zanegina O.2, Alexeevski A.3, Karyagina A.4,5, Spirin S.3

1Virology Department, Biological Faculty, Moscow State University, Moscow,

Russia

2Bioengineering and Bioinformatics Faculty, Moscow State University,

Moscow, Russia

3Belozersky Institute, Moscow State University, Moscow, Russia

4N.F.Gamaleya Research Institute of Epidemiology and Microbiology, Moscow,

Russia

5Institute of Agricultural Biotechnology, Moscow, Russia

A TOOL FOR COMPARATIVE ANALYSIS OF SOLVENT MOLECULES

IN PDB STRUCTURES

12:05

11:40-6 Naumoff D.G

State Institute for Genetics and Selection of Industrial Microorganisms,

Moscow, Russia

DEVELOPMENT OF A HIERARCHICAL CLASSIFICATION

OF THE TIM-BARREL TYPE GLYCOSIDE HYDROLASES

12:25

12:05-7 Safro M.*1,Tworowski D.1, Feldman A.2

1Department of Structural Biology, Weizmann Institute of Science, Rehovot, Israel

2EML Research gGmbH, Heidelberg, Germany

HOW ARE CHARGED RESIDUES DISTRIBUTED AMONG

FUNCTIONALLY DISTINCT STRUCTURAL DOMAINS

OF AMINOACYL-tRNA SYNTHETASES?

12:50

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12:25-12:50-14:30 Lunch break

Co-chairpersons:

Dr Vladimir Kuznetsov, Genome Institute of Singapore, Singapore

Prof Sergei Chekmarev, Institute of Thermophysics Siberian Branch

of the Russian Academy of Sciences, Novosibirsk, Russia

1 Ivanisenko V.A 1, Demenkov P.S. 2, Fomin E.S. 1, Oshurkov I.S. 3, Korotkov R.O. 3,

Aman E.E. 1, Pintus S.S. 1,3, Startcev K.S. 3, Tatarnikova L.Yu. 3, Panina I.I. 3,

Sobolev A.A. 3, Seleznev I.V. 3, Elohov V.Yu. 3, Golovina A.N. 3, Aknazarov Z.I. 3,

Sharonova I.V. 3, Krestianova M.A. 3, Mishchenko E.L. 1, Magdysuk A.V. 3,

Nemiatov A.I. 3

1 Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia

2 Institute of Mathematics SB RAS, Novosibirsk, Russia

FASTPROT: A COMPUTATIONAL WORKBENCH FOR ANALYSIS

OF FUNCTION, ACTIVITY AND STRUCTURE OF PROTEINS

14:55

14:30-2 Chernorudskiy A.L., Shorina A.S., Garcia A., Gainullin M.R *

Nizhny Novgorod State Medical Academy, Nizhny Novgorod, Russia

DIRECT INFLUENCE OF UBIQUITYLATION ON A TARGET PROTEIN

ACTIVITY: “LOSS-OF-FUNCTION” MECHANISM REVEALED

BY COMPUTATIONAL ANALYSIS

15:20

14:55-3 Demenkov P.S.1*, Aman E.E.2, Ivanisenko V.A.2,3

1Sobolev Institute of Mathematics of the SB RAS, Novosibirsk, Russia

PREDICTION IN CHANGES OF PROTEIN THERMODYNAMIC

STABILITY UPON SINGLE MUTATIONS

15:40

15:20-4 Kochetov A.V.1*, Sarai A.2, Kolchanov N.A.1

1Institute of Cytology and Genetics, Novosibirsk, Russia

2Kyushu Institute of Technology, Dept Biochemical Engineering and Science,

Iizuka, Japan

THE CONTRIBUTION OF ALTERNATIVE TRANSLATION START

SITES TO HUMAN PROTEIN DIVERSITY

16:05

15:40-Coffee/tea break 16:05-16:35

5 Efremov R.G.

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, Moscow,

Russia

COMPUTER SIMULATIONS OF PEPTIDES AND PROTEINS

IN MEMBRANES: PERSPECTIVES IN DRUG DESIGN

17:00

16:35-6 Nicklaus M.

Center for Cancer Research, NCI/NIH, Frederick, USA

NEW DEVELOPMENTS AT THE NIH FOR INTEGRATION OF

SMALL-17:25

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17:00-MOLECULE DATABASES AND BIOINFORMATICS RESOURCES

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July 20, Thursday House of Scientists, Small Conference Hall

COMPARATIVE AND EVOLUTIONARY GENOMICS AND PROTEOMICS

Co-chairpersons:

Dr Vladimir Kapitonov, Genetic Information Research Institute, Mountain View,

California, USA

Dr Igor Makunin, ARC Special Research Centre for Functional and Applied

Genomics, Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia

1 Vitreschak A.G 1 *, Lyubetsky V.A.1, Gelfand M.S.1

1Institute for Information Transmission Problems of RAS, Moscow, Russia

EVOLUTIONAL AND FUNCTIONAL ANALYSIS OF T-BOX REGULON

IN BACTERIA IDENTIFICATION AND CHARACTERIZATION

OF NEW GENES INVOLVED IN AMINO ACID METABOLISM

9:55

9:30-2 Bazykin G.A.1*, Dushoff J.1, Levin S.1, Kondrashov A.2

1 Department of Ecology and Evolutionary Biology, Princeton University,

Princeton, NJ, USA

2 National Center for Biotechnology Information, NIH, Bethesda, USA

INSTANCES OF POSITIVE SELECTION AT CONSERVATIVE PROTEIN

10:20

9:55-3 Gunbin K.V., Suslov V.V., Kolchanov N.A.*

Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia

AROMORPHOSES AND ADAPTIVE MOLECULAR EVOLUTION:

MORPHOGENS AND SIGNALING CASCADE GENES

10:45

10:20-Coffee/tea break 10:45-11:15

4 Kondrashov F.A 1*, Koonin E.V.2, Morgunov I.G.3, Finogenova T.V.3,

Kondrashova M.N.4

1Section on Ecology, Behavior and Evolution, Division of Biological Sciences,

University of California at San Diego, La Jolla, USA

2National Center for Biotechnology Information, National Library

of Medicine, National Institutes of Health, Bethesda, USA

3Skryabin Institute of Biochemistry and Physiology of Microorganisms RAS,

Pushchino, Russia

4Institute of Theoretical and Experimental Biophysics RAS, Pushchino, Russia

EVOLUTION OF THE GLYOXYLATE CYCLE ENZYMES IN THE

METAZOA

11:40

11:15-5 Ramensky V 1*, Nurtdinov R.2, Neverov A.3, Mironov A. 2, Gelfand M. 2,4

1Engelhardt Institute of Molecular Biology RAS, Moscow, Russia

2Department of Bioengineering and Bioinformatics, Moscow State University,

Moscow, Russia

3State Scientific Center GosNIIGenetika, Russia

4Institute for Information Transmission Problems, RAS, Moscow, Russia

HUMAN GENOME POLYMORPHISM AND ALTERNATIVE SPLICING

12:05

11:40-6 Pintus S.S.1*, Fomin E.S.1, Oshurkov I.S.2, IvanisenkoV.A.1,2*

PHYLOGENETIC ANALYSIS OF THE p53 AND P63/P73 GENE FAMILIES

12:30

12:05-7 Sabitha K 1, 2, Jamil K.1, 2 *

1Genetics Department, Bhagawan Mahavir Hospital and Research Center,

Hyderabad, India

2Indo American Cancer Institute and Research Center, Hyderabad, India

ANALYSIS OF EGFR GENE MUTATIONS WHICH HAVE A RESPONSE

TO QUINAZOLIN INHIBITORS

12:55

12:30-12:55-14:30 Lunch break

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July 20, Thursday House of Scientists, Small Conference Hall

COMPARATIVE AND EVOLUTIONARY GENOMICS AND PROTEOMICS

Co-chairpersons:

Dr Sergei Rodin, Beckman Research Institute of the City of Hope, Duarte, USA

Dr Vassily Ramensky, Engelhardt Institute of Molecular Biology, the Russian

Academy of Sciences, Moscow, Russia

1 Ignatieva E.V.*, Oshchepkov D.Yu., Klimova N.V., Vasiliev G.V., Merkulova T.I.

Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia

ANALYSIS OF REGULATORY REGIONS OF ORTHOLOGOUS GENES:

PREDICTION OF SF1 BINDING SITES WITH SITECON METHOD

PROVED BY EXPERIMENTAL VERIFICATION AND COMPARATIVE

GENOMICS

14:55

14:30-2 Kolesnikov N.N.*, Elisafenko E.A., Zakian S.M.

EVOLUTION OF THE STRUCTURE OF THE XIST LOCUS

IN MAMMALS

15:20

14:55-3 Deyneko I.V.*1,2, Kalybaeva Y.M.1, Kel A.E 3, Blöcker H.*1, Kauer G. 4

1Department of Genome Analysis, GBF, Braunschweig, Germany

3BIOBASE GmbH, Wolfenbüttel, Germany

4University of Applied Sciences, Emden, Germany

HUMAN-CHIMPANZEE PROPERTY-DEPENDANT COMPARISONS

ON CHROMOSOMES 21