Community Ecology, BIOL 7083 – Spring 2014 Louisiana State University – Department of Biological Sciences

Community-level patterns: Species richness; alpha, beta & gamma diversity; some geographic patterns e.g., species-area curves, the processes that cause them e.g., Island Biogeography The

Community Ecology, BIOL 7083 – Spring 2014

Louisiana State University – Department of Biological Sciences

Reference List

I have presented the references under topic headings; the order corresponds to the course

schedule found in the syllabus For a reference that was used to prepare lectures under multiple topic headings, its citation appears once under the topic heading for which it was first used

If you find a reference incomplete or incorrect, I would appreciate receiving a message from you

to that effect Thank you!

1 What is Community Ecology?

Abrahamson, Warren G., ed 1989 Plant-Animal Interactions McGraw-Hill Publishing, NewYork, NY

Agrawal, Anurag A., David D Ackerly, Fred Adler, A Elizabeth Arnold, Carla Cáceres, Daniel F Doak, Eric Post, Peter J Hudson, John Maron, Kailen A Mooney, Mary Power, Doug Schemske, Jay Stachowicz, Sharon Strauss, Monica G Turner & Earl Werner 2007.Filling key gaps in population and community ecology Frontiers in Ecology and the Environment 5:145-152

Barash, David P 1973 The ecologist as Zen master The American Midland Naturalist 89:214-217

Bawa, Kamaljit S., W John Kress, Nalini M Nadkarni & Sharachchandra Lele 2004

Beyond paradise – meeting the challenges in tropical biology in the 21st century

Biotropica 36:437-446

Bray, J Roger & J T Curtis 1957 An ordination of the upland forest communities of

southern Wisconsin Ecological Monographs 27:325-349

Brown, J H & B A Maurer 1989 Macroecology: the division of food and space among species on continents Science 243:1145-1150

Carothers, John H 1986 Homage to Huxley: on the conceptual origin of minimum size ratiosamong competing species American Naturalist 128:440-442

Carpenter, Stephen R., E Virginia Armbrust, Peter W Arzberger, F Stuart Chapin III, James

J Elser, Edward J Hackett, Anthony R Ives, Peter M Kareiva, Mathew A Leibold, Per Lundberg, Marc Mangel, Nirav Merchant, William W Murdoch, Margaret A Palmer, Debra P C Peters, Steward T A Pickett, Kathleen K Smith, Diana H Wall & S

Zimmerman 2009 Accelerate synthesis in ecology and environmental sciences

factors on natural populations of the barnacle Balanus balanoides Ecological Monographs

31:61-104

Connell, Joseph H 1961 The influence of competition and other factors on the distribution of

the barnacle Chthamalus stellatus Ecology 42:710-723

Cowles, Henry Chandler 1899 The ecological relations of the vegetation on the sand dunes

of Lake Michigan The Botanical Gazette 27:95-117, 167-202, 281-308, 361-391

Damschen et al 2005 Visibility matters: increasing knowledge of women’s contributions to

ecology Front Ecol Environ 3:212-219

Darwin, Charles 1859 The Origin of Species by Means of Natural Selection

Diamond, J & T J Case, eds 1986 Community Ecology Harper and Row, NY, NY

[Dedicated to G Evelyn Hutchinson]

Dobzhansky, Theodosius 1973 Nothing in biology makes sense except in the light of

evolution The American Biology Teacher 35:125-129

Doty 1946 Ecology 27:315-328

Fauth, J E., J Bernardo, M Camara, W J Resetarits, Jr., J Van Buskirk & S A McCollum

1996 Simplifying the jargon of community ecology: A conceptual approach The

American Naturalist 147:282-286

Forbes, Stephen A 1887 The lake as a microcosm [Reprinted in Bulletin of the Illinois

State Natural History Survey 15 (1925):537-550]

Gleason, H A 1926 The individualistic concept of the plant association Bulletin of the Torrey Botanical Club 53:7-26

Gotelli, Nicholas J 2001 A Primer of Ecology, 3rd ed Sinauer Assocs., Inc., Sunderland,

MA

Gotelli, Nicholas J & Gary R Graves 1996 Null Models in Ecology Smithsonian

Institution Press, Washington, DC

Gotelli, N J & B McGill 2006 Null versus neutral models: What’s the difference?

Ecography 29:793-800

HilleRisLambers, J., P B Adler, W S Harpole, J M Levine & M M Mayfield 2012 Rethinking community assembly through the lens of coexistence theory Annual Review

of Ecology, Evolution & Systematics 43:227-248

Holdridge, L R 1947 Determination of world plant formations from simple climatic data Science 105:367-368

Howe, H F & L C Westley 1988 Ecological Relationships of Plants and Animals Oxford University Press, Oxford, UK

Huston, Michael A & Steve Wolverton 2011 Regulation of animal size by eNPP,

Bergmann’s rule, and related phenomena Ecological Monographs 81:349-405

Hutchinson, G Evelyn 1951 Copepodology for the ornithologist Ecology 32:571-577.Hutchinson, G Evelyn 1965 The Ecological Theater and the Evolutionary Play Yale University Press, New Haven, CT

Hutchinson, G Evelyn 1967 A treatise on limnology Vol II John Wiley & Sons, New York, NY

Huxley, J 1942 Evolution: the modern synthesis Harper, New York, NY

Inchausti, Pablo 1994 Reductionist approaches in community ecology Am Nat

143:201-221

Kaspari, Michael 2008 Knowing your warblers: thoughts on the 50th anniversary of

MacArthur (1958) Bulletin of the Ecological Society of America October:448-458

Keddy, Paul 2005 J V S 16:145-150 Canon for plant ecology.

Lawton, John H 1999 Are there general laws in ecology? Oikos 84:177-192

Leibold, M A., M Holyoak, N Mouquet, P Amarasekare, J M Chase, M F Hoopes, R D Holt, J B Shurin, R Law, D Tilman, M Loreau & A Gonzalez 2004 The

metacommunity concept: a framework for multi-scale community ecology Ecology Letters 7:601-613

Lewontin, R C 1974 The Genetic Basis of Evolutionary Change Columbia U Press, N.Y

[P A Keddy (1992; Keddy & Weiher chapt 1999, pg 19) refers to Lewontin’s description

of “the agony of community ecology”]

Lindeman, Raymond L 1942 The trophic-dynamics aspect of ecology Ecology 23:399-418.MacArthur, Robert H 1958 Population ecology of some warblers of northeastern coniferous forests Ecology 39:599-619

MacArthur, Robert H 1971 Patterns of terrestrial bird communities Pp 189-221 in D S Farner & J R King, eds Avian Biology Academic Press, New York, NY

MacArthur, Robert H 1972 Geographical Ecology: Patterns in the Distribution of Species Princeton University Press, Princeton, NJ

Martínez del Rio, Carlos & Arthur D Middleton 2010 Laws for ecology? Ecology

91:1244-1245 [Book review of Dodds, Walter K 2009 Laws, theories, and patterns in ecology.]May, Robert M 1986 The search for patterns in the balance of nature: advances and retreats.Ecology 67:1115-1126

Matthews, W J 1998 Patterns in Freshwater Fish Ecology Chapman and Hall, NY, NY.McGill, Brian J., Brian J Enquist, Evan Weiher & Mark Westoby 2006 Rebuilding

community ecology from functional traits TREE 21:178-185

McIntosh, R P 1985 The Background of Ecology Cambridge University Press

Merriam 1889

Mittelbach, Gary G 2012 Community Ecology Sinauer, Sunderland, MA

Morin, Peter J 1999 Community Ecology Blackwell Science, Inc., Oxford, U.K

Morin, Peter J 2011 Community Ecology, 2nd ed Wiley-Blackwell, Oxford, U.K

Paine, Robert T 2010 Macroecology: Does it ignore or can it encourage further ecological syntheses based on spatially local experimental manipulations? The American Naturalist 176:385-393

Real, Leslie A & James H Brown, eds 1991 Foundations of Ecology: Classic Papers with

Commentaries The University of Chicago Press, Chicago, IL

Ricklefs, Robert E 2008 Disintegration of the ecological community The American

Review of Biology 85:293-318.

Scheiner, Samuel M & Michael R Willig 2008 A general theory of ecology Theoretical Ecology 1:21-28

Schoener, Thomas W 2011 The newest synthesis: understanding the interplay of

evolutionary and ecological dynamics Science 331:426-429

Shipley, Bill & Paul A Keddy 1987 The individualistic and community-unit concepts as falsifiable hypotheses Vegetatio 69:47-55

Simberloff, D 1983 Sizes of coexisting species Pp 404-430 in D J Futuyma & M Slakin, eds Coevolution Sinauer, Sunderland, MA

Simberloff, Daniel 2004 Community ecology: is it time to move on? The American

Naturalist 163:787-799

Smith, F A., S K Lyons, S K M Ernest & J H Brown 2008 Macroecology: more than the division of food and space among species on continents Progress in Physical

Geography 32:115-138

Strong, D R., Jr 1980 Null hypotheses in ecology Synthese 43:271-285

Strong, D R., Jr., D Simberloff, L G Abele & A B Thistle, eds 1984 Ecological

Communities: Conceptual Issues and the Evidence Princeton University Press, Princeton,

NJ [This volume was in part a reaction to Cody & Diamond (1975), see pg 4; Dedicated

to Richard P Seifert]

Thompson, John N., O J Reichman, Peter J Morin, Gary A Polis, Mary E Power, Robert W Sterner, Carol A Couch, Laura Gough, Robert Holt, David U Hooper, Felicia Keesing, Charles R Lovell, Bruce T Milne, Manuel C Molles, David W Roberts & Sharon Y Strauss 2011 Frontiers of Ecology BioScience:51:15-24

Turchin, P 2001 Does population ecology have general laws? Oikos 94:17-26.

Turner, Monica G 1989 Landscape ecology: The effect of pattern on process Annual Review of Ecology & Systematics 20:171-197

Turner, Monica G 2005 Landscape ecology in North America: Past, present, and future Ecology 86:1967-1974

Turner, Monica G 2005 Landscape ecology: What is the state of the science? Annual Review of Ecology, Evolution & Systematics 36:319-344

Urban, D L et al 2002 Extending community ecology to landscapes Ecoscience

Applications

Vorhoef & Morin 2010 Community Ecology: Processes, Models, and Applications

Watt, A S 1947 Pattern and process in the plant community Journal of Ecology 35:1-22.Wethey, David 1984 Biological Bulletin [Repeat of Connell’s studies in New England.]Whittaker, Robert H xxxx Gradient analysis of vegetation… Biol Rev Cambridge Phil Soc 42:207-

Whittaker, Robert H Ecol Monogr 26:1-69.

Whittaker, Robert H 1975 Communities and Ecosystems, 2nd ed MacMillan, New York,

Woodward, F I., M R Lomas & C K Kelly 2004 Global climate and the distribution of plant biomes Phil Trans R Soc Lond B 359:1465-1476

2 Community-level patterns: Species richness; alpha, beta & gamma diversity; some geographic patterns (e.g., species-area curves), the processes that cause them (e.g., Island Biogeography Theory), and considerations of scale; etc.

Allouche, Omri, Michael Kalyuzhny, Gregorio Moreno-Rueda, Manuel Pizarro & Ronen Kadmon 2012 Area-heterogeneity tradeoff and the diversity of ecological communities Proceedings of the National Academy of Sciences 109:17495-17500

Brown, James H 1995 Macroecology The University of Chicago Press, Chicago, IL

Caley, M Julian & Dolph Schluter 1997 Relationship between local and regional diversity Ecology 78:70-80

Chiarucci, Alessandro, Giovanni Bacaro & Samuel M Scheiner 2011 Old and new

challenges in using species diversity for assessing biodiversity Philosophical Transactions

of the Royal Society B 366:2426-2437

Chown, Steven L., Brent J Sinclair, Hans P Leinaas & Kevin J Gaston 2004 Hemispheric asymmetries in biodiversity – a serious matter for ecology PLoS Biology 2:1701-1707

Colwell, R EstimateS [Freeware software for estimating a variety of variables useful for

describing community-level patterns; available at: http://viceroy.eeb.uconn.edu/estimates]

Colwell, Robert K., Anne Chao, Nicholas J Gotelli, Shang-Yi Lin, Chang Xuan Mao, Robin L.Chazdon & John T Longino 2012 Models and estimators linking invidividual-based and sample-based rarefaction, extrapolation and comparison of assemblages Journal of Plant Ecology 5:3-21

Condit, Richard, Robin B Foster, Stephen P Hubbell, R Sukumar, Egbert G Leigh, N Manokaran, Suzanne Loo de Lao, James V LaFrankie & Peter S Ashton 1998

Assessing forest diversity on small plots: Calibration using species-individual curves from

50-ha plots Pp 247-268 in F Dallmeier & J A Comisky, eds., Forest Biodiversity:

Research, Monitoring and Modeling UNESCO, Paris, France

Condit, Richard, Nigel Pitman, Egbert G Leigh Jr., Jerome Chave, John Terborgh, Robin B Foster, Percy Nunez V., Salomon Aguilar, Renato Valencia, Gorky Villa, Helene C

Muller-Landau, Elizabeth Losos & Stephen P Hubbell 2002 Beta-diversity in tropical forest trees Science 295:666-669

Crist, Thomas O., Joseph A Veech, Jon C Gering & Keith S Summerville 2003

Partitioning species diversity across landscapes and regions: a hierarchical analysis of a, b,and g diversity Am Nat 162:734-743

Currie, D J., G G Mittelbach, H V Cornell, R Field, J.-F Guégan, B A Hawkins, D M Kaufman, J T Kerr, T Oberdorff, E O’Brien, J R G Turner 2004 Predictions and

tests of climate-based hypotheses of broad-scale variation in taxonomic richness Ecology

Letters 7(12): 1121-1134 [Sebastian pointed out their 3 hypotheses; along with Evans et al.

Gilpin, Michael E & Jared M Diamond 1976 Calculation of immigration and extinction curves from the species-area-distance relation Proceedings of the National Academy of Sciences USA 73:4130-4134

Gotelli, N EcoSim [Freeware software for a variety of null-model analyses within the realm

of community ecology; available at: http://homepages.together.net/~gentsmin/ecosim.htm]

Gotelli, Nicholas J & Robert K Colwell 2001 Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness Ecology Letters 4:379-

391

Gotelli, N J et al 2009 Patterns and causes of species richness: a general model for

macroecology Ecology Letters 12:873-886

Gross, Katherine L., Gary G Mittelback & Heather L Reynolds 2005 Grassland invasibilityand diversity: Responses to nutrients, seed input, and disturbance Ecology 86:476-486 Harrison, Susan & Howard Cornell 2008 Toward a better understanding of the regional causes of local community richness Ecology Letters 11:969-979

Harrison, Susan, Hugh D Safford, James B Grace, Joshua H Viers & Kendi F Davies 2006 Ecological Monographs 76:41-56

Hawkins, Bradford A., Jose Alexandre Felizola Diniz-Filho, Carlos A Jaramillo & Stephen A Soeller 2006 Post-Eocene climate change, niche conservatism, and the latitudinal

diversity gradient of New World birds J Biogeography…

He & Hubbell 2011 Nature

He, Fangliang & Pierre Legendre 2002 Species diversity patterns derived from species-area models Ecology 83:1185-1198

Holyoak, Marcel, Mathew A Leibold & Robert D Holt, eds 2005 Metacommunities: Spatial Dynamics and Ecological Communities University of Chicago Press, Chicago, IL Hillebrand, Helmut 2005 Regressions of local on regional diversity do not reflect the

importance of local interactions or saturation of local diversity Oikos 110:195-198

Hurlbert, S H 1971 The nonconcept of species diversity: A critique and alternative

parameters Ecology 52:577-586

Hurlbert - unicorns

Karlson, Ronald H., Howard V Cornell & Terence P Hughes 2004 Coral communities are regionally enriched along an oceanic biodiversity gradient Nature 429:867-870

[Compare and contrast Wright et al (2003) with Karlson et al (2004) Wright et al

(2003) conclude that there is limited large-scale effect, whereas Karlson et al (2004) show strong large-scale effect on local diversity.]

Kraft et al 2011 Beta diversity… Science.

Kreft, Holger & Walter Jetz 2007 Global patterns and determinants of vascular plant

Losos, Jonathan B & Robert E Ricklefs, eds 2010 The Theory of Island Biogeography Revisited Princeton University Press, Princeton, NJ.

MacArthur, Robert H & Edward O Wilson 1967 The Theory of Island Biogeography Princeton University Press, Princeton, NJ

Magurran, Anne E 1988 Ecological Diversity and its Measurement Princeton University Press, Princeton, USA

Magurran, Anne E 2004 Measuring Biological Diversity Blackwell Publishing, Oxford, U.K

Myers, Jonathan A., Jonathan M Chase, Iván Jiménez, Peter M Jørgensen, Alejandro Murakami, Narel Paniagua-Zambrana & Renate Seidel 2013 Beta-diversity in temperate and tropical forests reflects dissimilar mechanisms of community assembly Ecology Letters 16:151-157

Araujo-Nekola, J C & P S White 1999 The distance decay of similarity in biogeography and ecology J Biogeogr 26:867-878

Niering, W., R Whittaker & C Lowe 1963 The Saguaro: a population in relation to its environment Science 142:15-23

Peet, Robert K 1974 The measurement of species diversity Annual Review of Ecology and Systematics 5:285-307

Plotkin, Joshua B., Matthew D Potts, Nandi Leslie, N Manokaran, James LaFrankie & Peter

S Ashton 2000 Species-area curves, spatial aggregation, and habitat specialization in tropical forests Journal of Theoretical Biology 207:81-99

Purvis, Andy & Andy Hector 2000 Getting the measure of biodiversity Nature 219

405:212-Rahel, F.J 1990 The hierarchical nature of community persistence: a problem of scale The American Naturalist 136:328-344

Ricklefs, Robert E 1987 Community diversity: Relative roles of local and regional

Scheiner, S M 1992 Measuring pattern diversity Ecology 73:1860-1867

Scheiner, Samuel M., Alessandro Chiarucci, Gordon A Fox, Matthew R Helmus, Daniel J McGlinn & Michael R Willig 2011 The underpinnings of the relationship of species richness with space and time Ecological Monographs 81:195-213

Scheiner, S M., S B Cox, M R Willig, G G Mittelbach, C Osenberg, M Kaspari 2000 Species richness, species-area curves, and Simpson’s paradox Evol Ecol Res 2:791-802.Simberloff, Daniel S 1973 Species turnover and equilibrium island biogeography Science 194:572-578.

Simberloff, Daniel S 1974 Equilibrium theory of island biogeography and ecology Annual Review of Ecology and Systematics 5:161-182

Stevens, Richard D & Michael R Willig 2002 Geographical ecology at the community level: Perspectives on the diversity of New World bats Ecology 83:545-560

Turchin, P 1996 Fractal analyses of animal movement: a critique Ecology 77:2086-2090 Veech, Joseph A., Keith S Summerville, Thomas O Crist & Jon C Gering 2002 The additive partitioning of species diversity: recent revival of an old idea Oikos 99:3-9 Wardle, David A., Gregor W Yeates, Gary M Barker, Peter J Bellingham, Karen I Bonner &Wendy M Williamson 2003 Island biology and ecosystem functioning in epiphytic soil communities Science 301:1717-1720

Whittaker, R H 1972 Evolution and measurement of species diversity Taxon 21:213-251 Wiens, J A 1989 Spatial scaling in ecology Functional Ecology 3:385-397

Wilson, J Bastow & Barbara J Anderson 2001 Species-pool relations: like a wooden light

bulb? Folia Geobotanica 36:35-44 [“The species pool concept is stimulating, but it is

probably operationally impossible to test Like a wooden light bulb, it is beautiful and interesting, but of little use” (Abstract)]

Wright, Justin P., Alexander S Flecker & Clive G Jones 2003 Local vs landscape controls

on plant species richness in beaver meadows Ecology 84:3162-3173 [Compare and

contrast Wright et al (2003) with Karlson et al (2004) Wright et al (2003) conclude that there is limited large-scale effect, whereas Karlson et al (2004) show strong large-scale

effect on local diversity.]

3 Community-level patterns: Relative abundance distributions

Bell, Graham 2001 Neutral macroecology Science 293:2413-2418

Chave, Jérôme, Helene C Muller-Landau & Simon A Levin 2002 Comparing classical community models: Theoretical consequences for patterns of diversity Am Nat 159:1-

23

Chisholm, Ryan A & Stephen W Pacala 2010 Niche and neutral models predict

asymptotically equivalent species abundance distributions in high-diversity ecological communities XXX

Conlisk et al 2009 Hubbell’s local abundance distribution: insights from a simple

colonization rule Oikos

Connolly, Sean R., Terry P Hughes, David R Bellwood & Ronald H Karlson 2005

Community structure of corals and reef fishes at multiple scales Science 309:1363-1365

de Aguiar, M A M., M Baranger, E M Baptestini, L Kaufman & Y Bar-Yam 2009 Global patterns of speciation and diversity Nature 460:384-387

Gotelli, Nicholas J 2001 A Primer of Ecology, 3rd ed Sinauer Assocs., Inc., Sunderland,

MA [Excellent overview of simple population and multi-species models.]

Gotelli, Nicholas J & Gary R Graves 1996 Null Models in Ecology Smithsonian

Institution Press, Washington, DC

Hubbell 1979.

Hubbell Coral reef symposium

Hubbell, Stephen P 2001 The Unified Neutral Theory of Biodiversity and Biogeography

Princeton University Press, Princeton, NJ [For class – Chapt 2: On current theories of

relative species abundance, pp 30-47; Chapt 3: Dynamical models of the relative

abundance of species, pp 48-75; Chapt 4: Local Community Dynamics Under Ecological Drift, see first two pages, i.e., pp 76-77]

May, Robert M 1975 Patterns of species abundance and diversity Pp 81-120 in M L Cody

& J M Diamond, eds., Ecology and Evolution of Communities Belknap Press of Harvard

University Press, Cambridge, MA

May, Robert M 1986 The search for patterns in the balance of nature: advances and retreats

Ecology 67:1115-1126 [See especially the final sections]

May, Robert M 1988 How many species are there on Earth? Science 241:1441-1449 McGill, Brian J 2003 A test of the unified neutral theory of biodiversity Nature 422:881-885

McGill, Brian J., Rampal S Etienne, John S Gray, David Alonso, Marti J Anderson, HabtamuKassa Benecha, Maria Dornelas, Brian J Enquist, Jessica L Green, Fangliang He, Allen H.Hurlbert, Anne E Magurran, Pablo A Marquet, Brian A Maurer, Annette Ostling, Candan

U Soykan, Karl I Ugland & Ethan P White 2007 Species abundance distributions: moving beyond single prediction theories to integration within an ecological framework Ecology Letters 10:995-1015

Nekola_Brown_2007_EcolLetters.pdf

Preston, F W 1948 The commonness, and rarity, of species Ecology 29:254-283

Preston, F W 1962 The canonical distribution of commonness and rarity Ecology

43:185-215, 410-432

Rosindell, James, Stephen P Hubbell & Rampal S Etienne 2011 The Unified Neutral Theory of Biodiversity and Biogeography at Age Ten Trends in Ecology & Evolution 26:340-348

Rosindell, James, Stephen P Hubbell, Fangliang He, Luke J Harmon & Rampal S Etienne

2012 The case for ecological neutral theory Trends in Ecology & Evolution 27:203-208.Volkov, Igor, Jayanth R Banavar, Fangliang He, Stephen P Hubbell & Amos Maritan 2005 Density dependence explains tree species abundance and diversity in tropical forests Nature 438:658-661

Volkov, Igor, Jayanth R Banavar, Stephen P Hubbell & Amos Maritan 2003 Neutral theoryand relative species abundance in ecology Nature 424:1035-1037

Volkov, Igor, Jayanth R Banavar, Stephen P Hubbell & Amos Maritan 2007 Patterns of relative species abundance in rainforests and coral reefs Nature 450:45-49

Volkov, Igor, Jayanth R Banavar, Stephen P Hubbell & Amos Maritan 2009 Inferring species interactions in tropical forests PNAS xx:xx-xx

Whittaker, R H 1965 Dominance and diversity in land plant communities Science

Brown, W L., Jr & E O Wilson 1956 Character displacement Systematic Zoology 64

5:49-Case & Gilpin 1974 PNAS

Chase, Jonathan M & Mathew A Leibold 2003 Ecological Niches: Linking Classial and Contemporary Approaches Chicago University Press, Chicago, IL

Connell, Joseph H 1980 Diversity and the coevolution of competitors, or the ghosts of competition past Oikos 35:131-138 [Get also J Roughgarden’s criticism of the paper andConnell’s reply!]

Grace, James B & David Tilman, eds 1990 Perspectives on Plant Competition Academic Press, Inc., San Diego, CA

Grether, Gregory F., Neil Losin, Christopher N Anderson & Kenichi Okamoto 2009 The role of interspecific interference competition in character displacement and the evolution ofcompetitor recognition Biological Reviews x:xx-xx

Hardin, Garrett 1960 The competitive exclusion principle Science 131:1292-1297

[Coined the term “competitive exclusion principle”]

Horn, H & R MacArther 1972 Competition among fugitive species in a harlequin

environment Ecology 53:749-752

Horn & May 1977

Hutchinson, G Evelyn 1957 Concluding remarks Cold Spring Harbor Symposium on Quantitative Biology 22:415-427

Keddy, Paul A 2001 Competition, 2nd ed Kluwer Academic Pubs., Dordrecht, The

Netherlands

Lewin, Roger 1983 Santa Rosalia was a goat Science 221:636-639

McPeek, Mark A 2012 Intraspecific density dependence and a guild of consumers coexisting

on one resource Ecology 93:2728-2735

Miller, T E., C P terHorst & J H Burns 2009 The ghost of competition present The American Naturalist 173:347-353

Pacala, Stephen W 1986 Neighborhood models of plant population dynamics II species models of annuals Theoretical Population Biology 29:262-292

Multi-Pacala, Stephen W & David Tilman 1994 Limiting similarity in mechanistic and spatial models of plant competition in heterogeneous environments The American Naturalist 143:222-257

Pfennig, Karin S & David W Pfennig 2009 Character displacement: ecological and

reproductive responses to a common evolutionary problem The Quarterly Review of Biology 84:253-276

Rees, Mark & Joy Bergelson 1997 Asymmetric light competition and founder control in plant communities Journal of Theoretical Biology 184:353-358

Riebesell, John F 1974 Paradox of enrichment in competitive systems Ecology 55:183-187.Roughgarden 1983

Scheffer_vanNes_2006_PNAS.pdf

Taper, Mark 1993 A new look at competition theory and the structure of ecological

communities Trends in Ecology and Evolution 8:308-309

Tilman, David 1982 Resource Competition and Community Structure Princeton University Press, Princeton, NJ

Tilman, David 1987 The importance of the mechanisms of interspecific competition The American Naturalist 129:769-774.

Tilman, David 1988 Dynamics and Structure of Plant Communities Princeton University Press, Princeton, NJ

Weiner, Jacob 1990 Asymmetric competition in plant populations Trends in Ecology and Evolution 5:360-364

5 Pair-wise species interactions: Competition II Empirical underpinnings

Adler, Peter B., Stephen P Ellner & Jonathan M Levine 2010 Coexistence of perennial plants: an embarrassment of niches Ecology Letters 13:1019-1029

Antonovics, Janis & Donald A Levin 1980 The ecological and genetic consequences of density-dependent regulation in plants Annual Review of Ecology and Systematics 11:411-452

Bolnick, Daniel I., Travis Ingram, William E Stutz, Lisa K Snowberg, On Lee & Jeff S Paull

2010 Ecological release from interspecific competition leads to decoupled changes in population and individual niche width Proceedings of the Royal Society B 277:1789-1797

Brown, James H & Diane W Davidson 1977 Competition between seed-eating rodents and ants in desert ecosystems Science 196:880-882 [Get also the newer paper – from

Sebastian Tello’s presentation – in which rodent-ant interaction is actually indirect

facilitation!]

Byers, James E 2000 Competition between two estuarine snails: Implications for invasions

of exotic species Ecology 81:1225-1239

Carrascal L M., J L Terrería & A Valido 1992 Habitat distribution of canary chaffinches among islands: Competitive exclusion or species-specific habitat preferences? Journal of Biogeography 19:383-390

Connell, Joseph H 1983 On the prevalence and relative importance of interspecific

competition: Evidence from field experiments The American Naturalist 122:661-696 Coomes, David A & Peter J Grubb 2000 Impacts of root competition in forests and

woodlands: a theoretical framework and review of experiments Ecological Monographs 70:171-207

Damgaard, Christian & Adeline Fayolle 2010 Measuring the importance of competition: a new formulation of the problem J Ecology 98:1-6

Dhondt,André A 2012 Interspecific Competition in Birds Oxford U Press, Oxford, UK.Dudley, Tom L., Carla M D’Antonio & Scott D Cooper 1990 Mechanisms and

consequences of interspecific competition between two stream insects Journal of Animal Ecology 59:849-866

Eberhard, William G 1989 Niche expansion in the spider Wendilgarda galapagensis

(Araneae, Theridiosomatidae) on Cocos Island Rev Biol Trop 37:163-168

Ferson, Scott, Pat Downey, Paul Klerks, Marc Weissburg, Irwin Kroot, Steven Stewart, Geoff Jacquez, James Ssemakula, Richard Malenky & Karl Anderson 1986 Competing

reviews, or why do Connell and Schoener disagree? The American Naturalist

127:571-576

Gause, G F 1932 Experimental studies on the struggle for existence Journal of

Experimental Biology 9:389-402.

Gause 1934 [See Begon, Harper, Townsend]

Goldberg, D E & A M Barton 1992 Patterns and consequences of interspecific

competition in natural communities: A review of field experiments with plants The American Naturalist 139:771-801

Grace, James B & David Tilman, eds 1990 Perspectives on Plant Competition Academic Press, Inc., San Diego, CA

Grant, P R 1968 Bill size, body size, and the ecological adaptations of bird species to competitive situations on islands Systematic Zoology 17:319-333

Grant, P R 1972 Interspecific competition among rodents Annual Reviews of Ecology & Systematics 3:79-106

Grant, P R 1972 Convergent & divergent character displacement Biological Journal of the Linnean Society 4:39-68

Grant, P R 1975 The classical case of character displacement Evolutionary Biology 337

8:237-Grant, Peter R 1986 Ecology & Evolution of Darwin’s Finches Princeton University Press, Princeton, NJ

Grant, P R & I Abbott 1980 Interspecific competition, null hypotheses and island

biogeography Evolution 34:332-341

Grant, Peter R & B Rosemary Grant 2008 How and Why Species Multiply: The Radiation

of Darwin’s Finches Princeton University Press, Princeton, NJ

Lawton, John 1991 Warbling in different ways Oikos 60:273-274

Lewis, Simon L & Edmund V J Tanner 2000 Effects of above- and belowground

competition on growth and survival of rain forest tree seedlings Ecology 81:2525-2538 Pacala, Stephen & Jonathan Roughgarden 1982 Resource partitioning and interspecific

competition in two two-species insular Anolis lizard communities Science 217:444-446 Pacala, Stephen W & Jonathan Roughgarden 1985 Population experiments with the Anolis

lizards of St Maarten and St Eustatius Ecology 66:129-141

Petren, Kenneth, Douglas T Bolger & Ted J Case 1993 Mechanisms in the competitive success of an invading sexual gecko species over an asexual native Science 259:354-358.Platt, W J & I M Weiss 1977 Resource partitioning and competition within a guild of fugitive prairie plants The American Naturalist 111:479-513

Richman, A D & T Price 1992 Evolution of ecological differences in the Old World leaf warblers Nature 355:817-821

Schluter, Dolph 1994 Experimental evidence that competition promotes divergence in adaptive radiation Science 266:798-801

Schluter, Dolph & John Donald McPhail 1992 Ecological character displacement and speciation in sticklebacks The American Naturalist 140:85-108

Schoener, T W 1983 Field experiments on interspecific competition The American

Naturalist 122:240-285

Schoener, T W 1985 Some comments on Connell’s and my reviews of field experiments on interspecific competition The American Naturalist 125:730-740

Silander & Antonovics 1982 Analysis of interspecific interactions in coastal plant

community – a perturbation approach Nature 298:557-560

Silander, John A., Jr & Stephen W Pacala 1985 Neighborhood predictors of plant

performance Oecologia 66:256-263

Tansley 1917 [See Begon, Harper & Townsend]

Townsend, Howard M., Kathryn P Huyvaert, Peter J Hodum & David J Anderson 2002 Nesting distributions of Galápagos boobies (Aves: Sulidae): an apparent case of

amensalism Oecologia 132:419-427

Welden, C W & W L Slauson 1986 The intensity of competition versus its importance:

An overlooked distinction and some implications Quarterly Review of Biology 61:23-44

6 Pair-wise species interactions: Predator-prey, parasitoid-host & parasite-host

Berger, The Better to Eat You With

Berger et al 2001 Science 291:1036-1039

Berryman, A A 1992 The origins and evolution of predator-prey theory Ecology

Dobson, A P & P J Hudson 1992 Regulation and stability of a free-living host-parasite

system: Trichostrongylus tenuis in red grouse II Population models Journal of Animal

Ecology 61:487-498

Eberhard, W G 1975 The ecology and behavior of a subsocial pentatomid bug and two scelionid wasps: strategy and counterstrategy in a host and its parasites Smith Contrib Zool 205:1-39

Eberhard, William G 2000 Spider manipulation by a wasp larva Nature 406:255-256.Elton, C & M Nicholson 1942 The ten-year cycle in numbers of the lynx in Canada Journal of Animal Ecology 11:215-244

Ewald, Paul W 1994 Evolution of Infectious Disease Oxford University Press, Oxford, U.K

Feder, Martin E & George V Lauder 1986 Predator-Prey Relationships: Perspectives and Approaches from the Study of Lower Vertebrates Chicago University Press, Chicago, IL

Gilbert, Gregory S 2002 Evolutionary ecology of plant diseases in natural ecosystems Ann.Rev Phytopathol 40:13-43.

Gilbert, Gregory S & Campbell O Webb 2007 Phylogenetic signal in plant pathogen-host range PNAS 104:4979-4983

Gilg, Olivier, Ilkka Hanski & Benoît Sittler 2003 Cyclic dynamics in a simple vertebrate predator-prey community Science 302:866-868

Glasser, J W 1979 The role of predation in shaping and maintaining the structure of

communities The American Naturalist 113:631-641

Godfray, H C J 1994 Parasitoids: Behavioral and Evolutionary Ecology Princeton

University Press, Princeton, NJ

Godfray, H C J & S W Pacala 1992 Aggregation and the population dynamics of

parasitoids and predators The American Naturalist 140:30-40

Gurney, W S C., S P Blythe & R M Nisbet 1980 Nicholson’s blowflies revisited Nature287:17-21

Harrison, Gary W 1995 Comparing predator-prey models to Luckinbill’s experiment with

Didinium and Paramecium Ecology 76:357-374

Herre, Edward Allen 1993 Population structure and the evolution of virulence in nematode parasites of fig wasps Science 259:1442-1445

Holling, C S 1959 The components of predation as revealed by a study of small mammal predation of the European pine sawfly The Canadian Entomologist 91:293-320

Hudson, Peter J., Andy P Dobson & Dave Newborn 1998 Prevention of population cycles

Keith, L B 1983 Role of food in hare population cycles Oikos 40:385-395

Krebs, Charles J., Rudy Boonstra, Stan Boutin & A R E Sinclair 2001 What drives the year cycle of snowshoe hares? BioScience 51:25-35

10-Krebs, J R & N B Davies 1984 Behavioural Ecology: An Evolutionary Approach 2nd

Edition Blackwell Scientific Publications, Oxford, UK

Krebs, J R & N B Davies 1987 An Introduction to Behavioural Ecology 2nd Edition Blackwell Scientific Publications, Oxford, UK

Lively & Dybdahl

Loyn, Richard H., Ross G Runnalls & Gail Y Forward 1983 Territorial Bell Miners and other birds affecting populations of insect prey Science 221:1411-1413

Luckinbill, L S 1973 Coexistence in laboratory populations of Paramecium aurelia and its predator Didinium nasutum Ecology 54:1320-1327.

Luckinbill, L S 1974 The effects of space and enrichment on a predator-prey system Ecology 55:1142-1147

May, Robert M 1972 Limit cycles in predator-prey communities Science 177:900-902 May, Robert M 1983 Parasitic infections as regulators of animal populations American Scientist 71:36-45

McCauley, Shannon J., Locke Rowe & Marie-Josee Fortin 2011 The deadly effects of

“nonlethal” predators Ecology 92:2043-2048

Mitchell, Charles E & Alison G Power 2003 Release of invasive plants from fungal and viral pathogens Nature 421:625-627

Murdoch, William W 1969 Switching in general predators: Experiments on predator

specificity and stability of prey populations Ecological Monographs 39:335-354

Murdoch, W W., R M Nisbet, E McCauley, A M DeRoos & W S C Gurney 1998 Plankton abundance and dynamics across nutrient levels: Tests of hypotheses Ecology 79:1339-1356

Page, Rachel A & Michael J Ryan 2005 Flexibility in assessment of prey cues: frog-eating bats and frog calls Proc R Soc B 272:841-847

Parker, Ingrid M & Gregory S Gilbert 2004 The evolutionary ecology of novel pathogen interactions Annual Review of Ecology, Evolution & Systematics 35:675-700.Reeve, J D., J T Cronin and D R Strong 1994 Parasitism and generation cycles in a salt-marsh planthopper Journal of Animal Ecology 63: 912-920

plant-Rosenzweig, Michael L 1971 Paradox of enrichment: Destabilization of exploitation

ecosystems in ecological time Science 171:385-387

Sait, Steven M., Wei-Chung Liu, David J Thompson, H Charles J Godfray & Michael Begon

2000 Invasion sequence affects predator-prey dynamics in a multi-species interaction Nature 405:448-450

Sanford, Eric, Melissa S Roth, Glenn C Johns, John P Wares & George N Somero 2003 Local selection and latitudinal variation in a marine predator-prey interaction Science 300:1135-1137

Sih, Andrew, Philip Crowley, Mark McPeek, James Petranka & Kevin Strohmeier 1985 Predation, competition, and prey communities: A review of field experiments Annual Review of Ecology and Systematics 16:269:311

Sinclair, A R E., Simon Mduma & Justin S Brashares 2003 Patterns of predation in a diverse predator-prey system Nature 425:288-290

Vaughn, Caryn C & Christopher M Taylor 2000 Macroecology of a host-parasite

relationship Ecography 23:11-20

Vermeij, Geerat J 1987 Evolution and Escalation: An Ecological History of Life Princeton University Press

Westover, K M & J D Bever 2001 Mechanisms of plant species coexistence:

complementary roles of rhizosphere bacteria and root fungal pathogens Ecology 3294

82:3285-Williams, G C & R M Nesse 1991 The dawn of Darwinian medicine Quarterly Review of Biology 66:1–22.

Williams, Kathy, Kimberly G Smith & Frederick M Stephen 1993 Emergence of 13-yr periodical cicadas (Cicadidae: Magicicada): Phenology, mortality, and predator satiation Ecology 74:1143-1152

Wilson, Erin E., Lynne M Mullen & David A Holway 2009 Life history plasticity

magnifies the ecological effects of a social wasp invasion PNAS xx:xxx-xxx

7 Pair-wise species interactions: Herbivory

Abrahamson, Warren G., ed 1989 Plant-Animal Interactions McGraw-Hill Publishing, NewYork, NY

Adler, Lynn S 2000 Alkaloid uptake increases fitness in a hemiparasitic plant via reduced herbivory and increased pollination American Naturalist 156:92-99

Adler, Lynn S 2003 Ecology 2083-2091

Agrawal, Anurag A 1998 Leaf damage and associated cues induce aggressive ant

recruitment in a Neotropical ant-plant Ecology 79:2100-2112

Agrawal, Anurag A., Mark Fishbein, Rayko Halitschke, Amy P Hastings, Daniel L Rabosky

& Sergio Rasmann 2009 Evidence for adaptive radiation from a phylogenetic study of plant defenses PNAS xx:xx-xx

Belsky, A J., W P Carson, C L Jensen & G A Gox 1993 Overcompensation by plants: Herbivore optimization or red herring? Evolutionary Ecology 7:109-121

Bennett, A & J D Bever 2007 Mycorrhizal mediation of plant response to herbivory Ecology 88:210–218

Benrey, Betty & Robert F Denno 1997 The slow-growth-high-mortality hypothesis: A test using the cabbage butterfly Ecology 78:987-999

Bond W J & J A Silander 2007 Springs and wire plants: anachronistic defences against

Madagascar's extinct elephant birds Proc Roy Soc B 274:1985-1992 [Notice the ghosts

of herbivory past!]

Bruinsma, M., and M Dicke 2008 Herbivore-induced indirect defense: from induction

mechanisms to community ecology Pages 31-60 in A Schaller, editor Induced plant resistance to herbivory Springer Science+Business Media B.V [Add fig from Amanda Accamando’s presentation!]

Coley, P D 1983 Herbivory and defensive characteristics of tree species in a lowland tropical forest Ecological Monographs 53:209-233

Coley, P D & J A Barone 1996 Herbivory and plant defenses in tropical forests Annual Review of Ecology and Systematics 27:305-335

Coley, P D., J P Bryant & F S Chapin, III 1985 Resource availability and plant herbivore defense Science 230:895-899

anti-Coley, Phyllis D., John Lokvam, Kathleen Rudolph, Keryn Bromberg, Tara E Sackett, Leslie Wright, Tania Brenes-Arguedas, Dan Dvorett, Seth Ring, Alex Clark, Caroline Baptiste, R.Toby Pennington & Thomas A Kursar 2005 Divergent defensive strategies of young

leaves in two species of Inga Ecology 86:2633-2643

Dietz, Hansjörg, Lea R Wirth & Holger Buschmann 2004 Variation in herbivore damage to invasive and native woody plant species in open forest vegetation on Mahé, Seychelles Biological Invasions 6:511-521

Dyer, L A., M S Singer, J T Lill, J O Stireman, G L Gentry, R J Marquis, R E Ricklefs,

H F Greeney, D L Wagner, H C Morais, I R Diniz, T A Kursar & P D Coley 2007.Host specificity of Lepidoptera in tropical and temperate forests Nature 448:696-699.Ehrlich, P & P Raven 1964 Butterflies and plants: A study in coevolution Evolution 18:586-608

Fadzly, Nik, Cameron Jack, H Martin Schaefer & K C Burns 2009 Ontogenetic colour changes in an insular tree species: signalling to extinct browsing birds? New Phytologist

x:xx-xx [Notice the ghosts of herbivory past!]

Farrell & Mitter 1998 The timing of insect/plant diversification: might Tetraopes

(Coleoptera: Cerambycidae) and Asclepias (Asclepiadaceae) have co-evolved? Biol J

Linn Soc 63:553-577

Feeny, P P 1976 Plant apparency and chemical defense Pp 1-40 in J Wallace & R L Mansell, eds., Biochemical Interactions Between Plants and Insects Recent Advances in

Phytochemistry 10 Plenum Press, USA

Fine, Paul V A., Italo Mesones & Phyllis D Coley 2004 Herbivores promote habitat

specialization by trees in Amazonian forests Science 305:663-665

Futuyma, D J 1976 Food plant specialization and environmental predictability in

Lepidoptera The American Naturalist 110:285-292

Goheen, Jake – from seminar at LSU 11/9/09, thorniest acacias on richest soils at Mpala (counter Coley predictions)

Greenwood & Atkinson (1980) [Moa-browsing hypothesis]

Grubb, Peter J 1992 A positive distrust of simplicity – lessons from plant defences and from competition among plants and animals Journal of Ecology 80:585-610

Hay, Mark E 1997 The ecology and evolution of seaweed-herbivore interactions on coral reefs Proceedings of the 8th International Coral Reef Symposium Vol I:23-32

Herms, D A & W J Mattson 1992 The dilemma of plants: To grow or defend The Quarterly Review of Biology 67:283-335

Howe, H F & J S Brown 2001 The ghost of granivory past Ecology Letters 4:371-378.Janzen, D H 1980 When is it coevolution? Evolution 34:611-612

Karban, Richard 1989 Community organization of Erigeron glaucus folivores: effects of

competition, predation and host plant Ecology 70:1028-1039

Karban, R & I T Baldwin 1997 Induced Responses to Herbivory University of Chicago Press, Chicago, IL

Kitajima, Kaoru 1994 Relative importance of photosynthetic traits and allocation patterns as correlates of seedling shade tolerance of 13 tropical trees Oecologia 98:419-428

Marquis, Robert J 1984 Leaf herbivores decrease fitness of a tropical plant Science

Monographs 55:259-294

Moles, Angela T et al 2010 Functional Ecology [Lat gradients in defense & herbivory]Novotny, Vojtech, Scott E Miller, Jiri Hulcr, Richard A I Drew, Yves Basset, Milan Janda, Gregory P Setliff, Karolyn Darrow, Alan J A Stewart, John Auga, Brus Isua, Kenneth Molem, Markus Manumbor, Elvis Tamtiai, Martin Mogia & George D Weiblen 2007 Low beta diversity of herbivorous insects in tropical forests Nature 448:692-695

O’Dowd, D J & M F Wilsson 1989 Leaf domatia and mites on Australian plants:

Ecological and evolutionary implications Biological Journal of the Linnean Society 37:191-236

Parker, John D., Deron E Burkepile & Mark E Hay 2006 Opposing effects of native and exotic herbivores on plant invasions Science 311:1459-1461

Parker, John D & Mark E Hay 2005 Biotic resistance to plant invasions? Native herbivoresprefer non-native plants Ecology Letters 8:959-967.

Pennings et al 2009 Ecol – lat gradient in herbivory (see Ganesh’s proposal)

ReisenmanCE_etal_2010_ProcRoySoc_AntagonisticEffectsOfFloralScent.pdf

Rhoades, D F & R G Cates 1976 Toward a general theory of plant antiherbivore

chemistry Pp 168-213 in J Wallace & R L Mansell, eds., Biochemical Interactions

Between Plants and Insects Recent Advances in Phytochemistry 10 Plenum Press, USA.Stamp, Nancy 2003 Out of the quagmire of plant defense hypotheses The Quarterly

Review of Biology 78:23-55

Steinberg, Peter D., James A Estes & Frank C Winter 1995 Evolutionary consequences of food chain length in kelp forest communities Proceedings of the National Academy of Sciences, USA 92:8145-8148

Strong, Donald R 1988 Insect host range Ecology 69:885

Tiffin, Peter 2000 Are tolerance, avoidance, and antibiosis evolutionarily and ecologically equivalent responses of plants to herbivores? American Naturalist 155:128-138

Turlings T C J., Tumlinson, J H., and W J Lewis 1990 Exploitation of herbivore-induced plant odors by host-seeking parasitic wasps Science 250:1251-1253 [Add fig from Amanda Accamando’s presentation!]

Van Bael, Sunshine A., Jeffrey D Brawn & Scott K Robinson 2003 Birds defend trees fromherbivores in a Neotropical forest canopy Proceedings of the National Academy of

8 Pair-wise species interactions: Mutualisms (pollination, seed dispersal, trophic &

defense symbioses, etc.)

Adler, Lynn S 2000 Alkaloid uptake increases fitness in a hemiparasitic plant via reduced herbivory and increased pollination American Naturalist 156:92-99 [Same as for

herbivory this year!]

Arnold, A E., Z Maynard, G Gilbert, P D Coley & T.A Kursar 2000 Are tropical fungal endophytes hyperdiverse? Ecology Letters 3:267-274

Axelrod, R & W D Hamilton 1981 The evolution of cooperation Science 211:1390–1396.Barlow, Connie 2000 The Ghosts of Evolution Basic Books, New York, NY

Bergstrom, Carl T & Michael Lachmann 2003 The Red King effect: When the slowest runner wins the coevolutionary race Proceedings of the National Academy of Sciences, USA 100:593-598

Bertness, Mark D & Ragan Callaway 1994 Positive interactions in communities Trends in Ecology and Evolution 9:191-193

Bever, J D 2002 Negative feedback within a mutualism: Host-specific growth of

mycorrhizal fungi reduces plant benefit Proceedings of the Royal Society of London

Boucher, D H., ed 1985 The Biology of Mutualism Oxford University Press, Oxford, UK.

Boucher, D H., S James & K H Keeler 1982 The ecology of mutualism Annual Review

of Ecology and Systematics 13:315-347

Bronstein, J L 1994 Our current understanding of mutualism The Quarterly Review of Biology 69:31-51

Bronstein J L 2001 The exploitation of mutualisms Ecology Letters 4:277-287

Bronstein J L 2001 The costs of mutualism American Zoologist 41:825-839

Bronstein J L., R Alarcon & M Geber 2006 The evolution of plant-insect mutualisms New Phytologist 172:412-428

Burns, K C 2003 Broad-scale reciprocity in an avian seed dispersal mutualism Global Ecology & Biogeography 12:421-426

Clay, K & J Holah 1999 Fungal endophyte symbiosis and plant diversity in successional fields Science 285:1742-1744

Connor, R C 1995 The benefits of mutualism: A conceptual framework Biological

Reviews of the Cambridge Philosophical Society 70:427-457

Currie, Cameron R., Bess Wong, Alison E Stuart, Ted R Schultz, Stephen A Rehner, Ulrich

G Mueller, Gi-Ho Sung, Joseph W Spatafora & Neil A Straus 2003 Ancient tripartite coevolution in the attine ant-microbe symbiosis Science 299:386-388

Denison, R Ford, E Toby Kiers & Stuart A West 2003 Darwinian agriculture: when can humans find solutions beyond the reach of natural selection? Quart Review Biol 78:145-

Harder, Lawrence D & Steven D Johnson 2009 Darwin’s beautiful contrivances:

evolutionary and functional evidence for floral adaptation NewPhytologist 183:530-545.Herre, Edward Allen 1996 An overview of studies on a community of Panamanian figs Journal of Biogeography 23:593-607

Herre, E A., N Knowlton, U G Mueller & S A Rehner 1999 The evolution of

mutualisms: Exploring the paths between conflict and cooperation Trends in Ecology andEvolution 14:49-53

Hoeksema, Jason D & Emilio M Bruna 2000 Pursuing the big questions about interspecific mutualism: A review of theoretical approaches Oecologia 125:321-330

Howe, Henry F 1985 Gomphothere fruits: a critique American Naturalist 125:853-865 Howe, Henry F & Maria N Miriti 2004 When seed dispersal matters BioScience 54:651-

660

Jandér, K Charlotte & Edward Allen Herre 2010 Host sanctions and pollinator cheating in

the fig tree-fig wasp mutualism Proc Roy Soc B x:xx-xx

Janzen, Daniel H 1966 Interaction of the bull’s horn acacia (Acacia cornigera L.) with an ant inhabitant (Pseudomyrmex ferrugineq F Smith) in eastern Mexico University of

Kansas Science Bulletin 47:315-558

Janzen, Daniel H 1985 Spondias mombin is culturally deprived in megafauna-free forest Journal of Tropical Ecology 1:131-155 [Notice the ghosts of seed-dispersal mutualism

past!]

Janzen 1985 xxx In D Boucher, ed The Biology of Mutualism Oxford University Press,

Oxford, UK

Janzen, Daniel H & Paul S Martin 1982 Neotropical anachronisms: the fruits the

gomphotheres ate Science 215:19-27

Johnson, N C., P J Copeland, R K Crookston & F L Pfleger 1992 Mycorrhizae: Possibleexplanation for yield decline with continuous corn and soybean Agronomy Journal

Jordano, Pedro 1995 Frugivore-mediated selection on fruit and seed size: birds and St

Lucie's cherry, Prunus mahaleb Ecology 76:2627-2639.

Kersch, Monica Frank & Carlos Roberto Fonseca 2005 Abiotic factors and the conditional outcome of an ant-plant mutualism Ecology 86:2117-2126

Kiers, E Toby, Robert A Rousseau, Stuart A West & R Ford Denison 2003 Host sanctionsand the legume-rhizobium mutualism Nature 425:78-81

Knight, T M., J A Steets, J C Vamosi, S J Mazer, M Burd, D R Campbell, M R

Dudash, M O Johnston, R J Mitchell & T.-L Ashman 2005 Pollen limitation of plant reproduction: pattern and process Annual Reviews of Ecology, Evolution and Systematics36:467–497

Lanner, Ronald M 1996 Made for Each Other: A Symbiosis of Birds and Pines Oxford University Press, Oxford, UK

Leigh – Genes, bees & ecosystems

Leigh, Egbert, Jr 1994 Do insect pests promote mutualism among tropical trees? Journal of Ecology 82:677-680

Leigh, Egbert Giles, Jr 1999 Tropical Forest Ecology Oxford University Press, Oxford, UK

Leigh, Egbert Giles, Jr & Thelma Elizabeth Rowell 1995 The evolution of mutualism and other forms of harmony at various levels of biological organization Ecologie 26:131-158.Mainero, Jorge S & Carlos Martinez del Rio 1985 Cheating and taking advantage in

mutualistic associations In D Boucher, ed., The Biology of Mutualism Oxford

University Press, Oxford, UK

Memmott, Jane and Nickolas M Waser 2002 Integration of alien plants into a native pollinator visitation web Proceedings of the Royal Society of Londond, Series B

Paszkowski, U 2006 Mutualism and parasitism: the yin and yang of plant symbioses

Current Opinion on Plant Biology 9:364-370.

Roy, B.A and A Widmer 1999 Floral mimicry: a fascinating yet poorly understood

phenomenon Trends in Plant Science 4:325-330 [See also Bitty Roy’s work on Dracula

orchid floral mimicry of fungi.]

Seifert, E K., J D Bever & J M Maron 2009 Evidence for evolution of reduced

mycorrhizal dependence during plant invasion Ecology 90:1055–1062

Silliman, Brian R & Steven Y Newell 2003 Fungal farming in a snail PNAS

100:15643-15648

Stachowicz, John J & Robert B Whitlatch 2005 Multiple mutualists provide

complementary benefits to their seaweed host Ecology 86:2418-2427

Thompson, John N 1982 Interaction and Coevolution John Wiley and Sons, NY, NY.Thompson, John N 1994 The Coevolutionary Process University of Chicago Press,

Chicago, IL

Thompson, John N Geographic Mosaic… apparently a book…

Wagner, Diane 2000 Pollen viability reduction as a potential cost of ant association for

Acacia constricta (Fabaceae) American Journal of Botany 87:711-715

Wang, B & Y L Qiu 2006 Phylogenetic distribution and evolution of mycorrhizas in land plants Mycorrhiza 16:299–363.

Wheelwright, Nathaniel T & Gordon H Orians 1982 Seed dispersal by animals: Contrasts with pollen dispersal, problems of terminology, and constraints on coevolution The American Naturalist 119:402-413

Willmer, P B & G N Stone 1997 How aggressive ant-guards assist seed-set in Acacia

flowers Nature 388:165-167

Wright, David Hamilton 1989 A simple, stable model of mutualism incorporating handling time The American Naturalist 134:664-667

9 Multiple-species interactions: Food webs; foundation species, interaction networks,

keystone species & ecosystem engineers; higher-order interactions; indirect effects (e.g.,

apparent competition); top-down & bottom-up effects; tri-trophic interactions; trophic cascades; assembly rules (including priority effects, and contrasts with ecological filters or

sieves); extended phenotypes; etc.

Allesina, Stefano, David Alonso & Mercedes Pascual 2008 A general model for food web structure Science 320:658-661

Bakun, Andrew 2006 Wasp-waist populations and marine ecosystem dynamics: Navigating the “predator pit” topographies Progress in Oceanography 69:271-288 [“typical

community configuration, featuring many species at the bottom, many at the top, but contstricted to a very few dominant species at a mid-level…”; “the major control in these ecosystems may be neither ‘btoom up’ nor ‘top down’ but rather ‘both up and down from the middle’” pg 272.]

Bascompte, Jordi 2009 Mutualistic networks Front Ecol Environ 7:429-436

Beckerman, Andrew P., Maria Uriarte & Oswald J Schmitz 1997 Experimental evidence for

a behavior-mediated trophic cascade in a terrestrial food chain Proceedings of the

National Academy of Sciences, USA 94:10735-10738

Bennett, A., J Alers-Garcia & J D Bever 2006 Mechanisms of tritrophic interactions between plants, herbivores and AM fungi American Naturalist 167:141–152.

Billick, Ian & Ted J Case 1994 Higher order interactions in ecological communities: What are they and how can they be detected? Ecology 75:1529-1543

Bond, W J 1994 Keystone Species Pp 237-253 in Ernst-Detlef Shulze & Harold A Mooney (eds.) Biodiversity & Ecosystem Function Springer, NY, NY

Bond, W J 2005 Large parts of the world are brown or black: a different view on the ‘GreenWorld’ hypothesis J Veg Sci 16:261-266

Borer, E T., B S Halpern & E W Seabloom 2006 Asymmetry in community regulation: effects of predators and productivity Ecology 87:2813-2820

Briand, F 1983 Environmental control of food web structure Ecology 64:253-263

Bender, Edward A., Ted J Case & Michael E Gilpin 1984 Perturbation experiments in community ecology: theory and practice Ecology 65:1-13

Chase, J M 2007 Drought mediates the importance of stochastic community assembly Proc Natl Acad Sci USA 104:17430-17434

Chase, Jonathan M., Peter A Abrams, James P Grover, Sebastian Diehl, Peter Chesson, Robert D Holt, Shane A Richards, Roger M Nisbet & Ted J Case 2002 The interactionbetween predation and competition: A review and synthesis Ecology Letters 5:302-315 Cohen, Joel E 1978 Food Webs and Niche Space Princeton University Press, Princeton, NJ.Cohen, Joel 1989 Ecology: Just proportions in food webs Nature 341:104-105

Cohen, Joel E., Tomas Jonsson and Stephen R Carpenter 2003 Ecological community description using the food web, species abundance, and body size Proceedings of the National Academy of Science, USA 100:1781-1786

Connell, Joseph H 1990 Apparent versus “Real” Competition in Plants Pp 9-26 in James

B Grace & David Tilman, eds Perspectives in Plant Competition, Academic Press, Inc.,

New York, NY

Connor, E F & D Simberloff 1979 The assembly of species communities: Chance or competition? Ecology 60:1132-1140

Crooks, Kevin R & Michael E Soulé 1999 Mesopredator release and avifaunal extinctions

in a fragmented system Nature 400:563-566

Dayton P K 1972 Toward an understanding of community resilience and the potential effects of enrichments to the benthos at McMurdo Sound, Antarctica In: Parker BC (Ed) Proceedings of the colloquium on conservation problems in Antarctica Lawrence, KS: Allen Press

Diamond, J M 1975 Assembly of species communities Pp 342-444 in M L Cody & J M.Diamond, eds., Ecology and Evolution of Communities Harvard University Press,

Drake, James A 1991 Community-assembly mechanisms and the structure of an

experimental species ensemble The American Naturalist 137:1-26

Dyer, Lee A & Deborah Letourneau 2003 Top-down and bottom-up diversity cascades in detrital vs living food webs Ecology Letters 6:60-68

Dyer, L A., T R Walla, H F Greeney, J O Stireman & R F Hazen 2010 Diversity of interactions: a metric for studies of biodiversity Biotropica 42:281-289.

Ellison, Aaron M., Michael S Bank, Barton D Clinton, Elizabeth A Colburn, Katherine Elliott, Chelcy R Ford, David R Foster, Brian D Kloeppel, Jennifer D Knoepp, Gary M Lovett, Jacqueline Mohan, David A Orwig, Nicholas L Rodenhouse, William V Sobczak,Kristina A Stinson, Jeffrey K Stone, Christopher M Swan, Jill Thompson, Betsy Von Holle & Jackson R Webster 2005 Loss of foundation species: consequences for the structure and dynamics of forested ecosystems Frontiers in Ecology and the Environment 3:479-486

Elton, Charles 1927 Animal Ecology Sidgwick & Jackson Pubs., London, UK

Estes, J A & J F Palmisano 1974 Sea otters: Their role in structuring nearshore

communities Science 185:1058-1060

Estes, J A., M T Tinker, T M Williams & D F Doak 1998 Killer whale predation on sea otters linking oceanic and nearshore ecosystems Science 282:473-476

Estes, J A et al 2011 Trophic downgrading of planet Earth Science.

Fretwell, Stephen D 1977 The regulation of plant communities by food chains exploiting them Perspectives in Biology and Medicine 20:169-185

Fretwell, S D 1987 Food chain dynamics: The central theory of ecology? Oikos

50:291-301

Giguere, L 1979 An experimental test of Dodson’s hypothesis that Ambystoma (a

salamander) and Chaoborus (a phantom midge) have complementary feeding niches

Canadian Journal of Zoology 57:1091-1097

Goheen, Jake – from seminar at LSU 11/9/09, seeming indirect mutualism between mice and megaherbivores, since when megaherbivores excluded, mice suffer (???)

Gratton, Claudio & Robert F Denno 2003 Seasonal shift from bottom-up to top-down

impact in phytophagous insect populations Oecologia 134:487-495 [“It is now generally

accepted that bottom-up and top-down forces act in concert to influence populations of most phytophagous insects” pg 134]

Hairston, Nelson G., Frederick E Smith & Lawrence B Slobodkin 1960 Community structure, population control, and competition The American Naturalist 94:421-425 Halpern, Benjamin S., Karl Cottenie & Bernardo R Broitman 2006 Strong top-down control

in southern California kelp forest ecosystems Science 312:1230-1232

Hixon, Mark A & Geoffrey P Jones 2005 Competition, predation, and density-dependent mortality in demersal marine fishes Ecology 86:2847-2859

Holt, R D 1977 Predation, apparent competition, and the structure of prey communities Theoretical Population Biology 12:197-229

Holt, R D & J H Lawton 1994 The ecological consequences of shared natural enemies Annual Review of Ecology and Systematics 25:495-520

Huisman, J., Weissing, F.J 2002 Oscillations and chaos generated by competition for

interactively essential resources Ecol Res 17, 175-181.

Huisman, J & Weissing, F.J 2001 Biological conditions for oscillations and chaos generated

by multispecies competition Ecol 82, 2682-2695.

Huisman, J & Weissing, F J 2001 Fundamental unpredictability in multispecies

competition Amer Nat 157, 488-494.

Hunter, Mark D & Peter W Price 1992 Playing chutes and ladders: Heterogeneity and the

relative roles of bottom-up and top-down forces in natural communities Ecology

73:724-732

Jeffries, M J & J H Lawton 1984 Enemy free space and the structure of ecological

communities Biological Journal of the Linnaean Society 23:269-286

Jenkins, B., R L Kitching & S L Pimm 1992 Productivity, disturbance, and food web structure at a local spatial scale in experimental container habitats Oikos 65:249-255.Jones, Clive G., J H Lawton & M Shachak 1994 Organisms as ecosystem engineers Oikos 69:373-386

Jones, Clive G., Richard S Ostfeld, Michele P Richard, Eric M Schauber & Jerry O Wolff

1998 Chain reactions linking acorns to gypsy moth outbreaks and lyme disease risk Science 279:1023-1026

Kareiva, Peter M & Mark D Bertness 1997 Re-examining the role of positive interactions

in communities Ecology 78:1945 [See the articles introduced by Kareiva & Bertness in

this volume’s Special Feature section, many of which compare and contrast positive and negative interactions]

Kilronomos, J N 2002 Feedback with soil biota contributes to plant rarity and invasivesness

in communities Nature 417:67-70

Křivan, Vlastimil & Oswald J Schmitz 2004 Trait and density mediated indirect interactions

in simple food webs Oikos 107:239-250

Laska, Mark S & J Timothy Wootton 1998 Theoretical concepts and empirical approaches

to measuring interaction strength Ecology 79:461-476

Leibold 1989 [Herbivory & defense idea presented by Jake Goheen at LSU on 11/9/09.]Leibold, M A & H M Wilbur 1992 Interactions between food web structure and nutrients

on pond organisms Nature 360:341-343

Letnic, Mike, Freya Koch, Chris Gordon, Mathew S Crowther & Christopher R Dickman

2009 Keystone effects of an alien top-predator stem extinctions of native mammals Proc.Roy Soc B 276:3249-3256

Matson, P A & M D Hunter 1992 The relative contributions of top-down and bottom-up

forces in population and community ecology Ecology 73:723 [Introduction to a special

feature on top-down and bottom-up forces, with articles by Hunter & Price, Menge,

Power, and Strong]

May, Robert M 1973 Stability and Complexity in Model Ecosystems Princeton University Press, Princeton, NJ

McCann, Kevin, Alan Hastings & Gary R Huxel 1998 Weak trophic interactions and the balance of nature Nature 395:794-798

McLaren, B E & R O Peterson 1994 Wolves, moose, and tree rings on Isle Royale Science 266:1555-1558

Menge, Bruce A 1992 Community regulation: Under what conditions are bottom-up factors important on rocky shores? Ecology 73:755-765

Menge, Bruce A 1995 Indirect effects in marine rocky intertidal interaction webs: Patterns and importance Ecological Monographs 65:21-74

Menge, Bruce A., J Lubchenco, M E S Bracken, F Chan, M M Foley, T L Freidenburg, S

D Gaines, G Hudson, C Krenz, H Leslie, D N L Menge, R Russell & M S Webster

2003 Coastal oceanography sets the pace of rocky intertidal community dynamics PNAS100:12229-12234

Murdoch, W W 1966 “Community structure, population control, and competition” – a